A package for ontology engineering with deep learning and language models.
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Jul 28, 2025 - Python
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ontologies
Here are 77 public repositories matching this topic...
PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models
semantic-web owl knowledge-graph benchmarks ontologies hacktoberfest linked-open-data mechanisms biomedical-applications translational-research obofoundry biolink-model bioregistry
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May 3, 2024 - Python
NetworkX-based Python library for representing ontologies
graphs similarity networkx networks semantic-similarity ontologies digraph information-content intrinsic-similarity
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Jul 12, 2023 - Python
📛 A Python package for using ontologies, terminologies, and biomedical nomenclatures
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Aug 6, 2025 - Python
mOWL: Machine Learning library with Ontologies
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Jan 27, 2025 - Python
API for linked biological knowledge
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Apr 26, 2022 - Python
This repository contains the dataset and the source code for the classification of food categories from meal images.
deep-learning image-classification food-classification mhealth ontologies ehealth food-dataset food-tracker dietary multilabel-model food-categories
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Jul 6, 2022 - Python
Library for representing and working with ontologies in Python
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Aug 6, 2025 - Python
SQL and SQLite builds of OWL ontologies
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Apr 25, 2025 - Python
Automatic tagging and analysis of documents in an Apache Solr index for faceted search by RDF(S) Ontologies & SKOS thesauri
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Jan 16, 2022 - Python
MetaSRA: normalized sample-specific metadata for the Sequence Read Archive
natural-language-processing text-mining data-mining bioinformatics rna-seq biology biomedical-informatics annotation-processor ontologies entity-matching
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Aug 1, 2025 - Python
Python library for Entities, relationships and schemas extraction from documents
library ai knowledge-graph documents structured-data ontologies db-schema unstructured-data documentsearch llm automatic-ontologies extract-schema
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Dec 6, 2024 - Python
BiOnt: Deep Learning using Multiple Biomedical Ontologies for Relation Extraction
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Nov 30, 2023 - Python
Omnipy is a high level Python library for type-driven data wrangling and scalable workflow orchestration (under development)
metadata workflow json data etl universal orchestration data-wrangling fair ontologies research-data tabular data-models prefect type-driven pydantic
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Jul 18, 2025 - Python
A Python framework for integrating biological databases and structured data sources in Biological Expression Language (BEL)
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Nov 3, 2021 - Python
A python client for the ClassyFire API
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May 7, 2020 - Python
automating an RDF ontology import into Semantic Mediawiki
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Jul 4, 2024 - Python
🚀 Food-Biomarker Ontology defines the relationships between foods and their associated metabolites (biomarkers) through a formal ontology
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May 3, 2022 - Python
Extension of LinkML runtime for converting instances of LinkML classes to OWL (classes or instances)
templates design-patterns owl ontologies ontology-generation ontology-design-patterns metaclasses linkml json2owl yaml2owl tsv2owl ontology-mapping
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May 30, 2024 - Python
GBIF machine-readable resources
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Aug 6, 2025 - Python
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