satijalab / seurat
R toolkit for single cell genomics
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R toolkit for single cell genomics
R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data
A curated list of awesome R packages, frameworks and software.
🎓 A collection of interactive courses for the swirl R package.
Inferring CNV from Single-Cell RNA-Seq
Accurate sample inference from amplicon data with single nucleotide resolution
R package for detecting doublets in single-cell RNA sequencing data
An implementation of the Language Server Protocol for R
📊 A universal enrichment tool for interpreting omics data
R toolkit for the analysis of single-cell chromatin data
dplyr: A grammar of data manipulation
Simple Features for R
phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. See the phyloseq front page:
Fast, sensitive and accurate integration of single-cell data with Harmony
renv: Project environments for R.
R's data.table package extends data.frame:
An implementation of the Grammar of Graphics in R
A Wes Anderson color palette for R
Dynamic Documents for R
Produce PRISMA-2020 compliant flow diagrams
Make Complex Heatmaps