Official git repository for Biopython (originally converted from CVS)

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

Data intensive science for everyone.

In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more

Efficient pythonic random access to fasta subsequences

Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm

Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloning.

tools for genetic genealogy and the analysis of consumer DNA test results

Generate input parameters and coordinates for atomistic and coarse-grained simulations of polymers, ssDNA, and carbohydrates

Imports MetaHuman head and body components from a their DNA files, lets you customize them, then send them back to MetaHuman Creator.

Bioinformatics toolkits for manipulating sequence, alignment, and phylogenetic tree files

tools for reading, writing, merging, and remapping SNPs

[ISMB 2025] DNABERT_S: Learning Species-Aware DNA Embedding with Genome Foundation Models

nucleic acid folding

A package for designing compact and comprehensive capture probe sets.

Fast and flexible ORF finder

A fast 23andMe genome text file parser, now superseded by arv

A python wrapper for the benchling api

Protein language model trained on coding DNA

Python package to analyze DNA methylation data