ellipse and convex hull fitting package for stable isotope data

population and community dynamics on spatial graphs, in julia.

Phylocom R interface

A spatially explicit trait- and individual-based microbial systems modelling framework

A collection of functions to summarize the Portal Data

A Data Standard for Ecological Trait Datasets

Hierarchical Model of Species Communities (HMSC) is an R package, which provides extensive set of analytical tools devised for numerical analysis of data on ecological communities or other similarly structured data. The methodological core of the HMSC approach is centered on combination of hierarchical regression and latent factor models.

M.T. Farr, T. O’Brien, C.B. Yackulic, and E.F. Zipkin. (2022). Quantifying the conservation status and abundance trends of wildlife communities with detection-nondetection data. Conservation Biology e13934.

Rossman S., Ostrom P.H., Gordon F., and Zipkin E.F. 2016. Beyond carbon and nitrogen: guidelines for estimating three‐dimensional isotopic niche space. Ecology and Evolution 6: 2405-2413.

This repository contains all the materials needed to reproduce Roth et. al (2017): Functional ecology and imperfect detection of species. Methods in Ecology and Evolution.

Cohortz & Kohortz - Collaboration Portal

hugo static site generator based site hosted on Netlify for Nederland Community Greenhouse project

Content for a Community Ecology course

Constellat.io

Joint modelling of abundance and genetic diversity. An integrated model of population genetics and community ecology.

Code to make figures and certain analyses from "Source pool diversity and proximity shape the compositional uniqueness of insular mammal assemblages worldwide" (2021)

Lithofacies and temporal variation predict composition of Siluro-Devonian vertebrate, invertebrate, and plant communities

Making phylogenies for a list of fish species

This repository contains the research work from the "Techniques of Marine Research I" (TMR1) class taught by Margarita Brandt, about the community ecology of intertidal ecosystems in Ecuador mainland coast.