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Merged
merged 3 commits into from
Jan 29, 2025
Merged

chore(deps): update ci and devdependencies #522

merged 3 commits into from
Jan 29, 2025

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@renovate renovate bot commented Aug 5, 2024 •
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This PR contains the following updates:

Package Type Update Change
astral-sh/ruff-pre-commit repository minor v0.5.6 -> v0.9.3
codespell-project/codespell repository minor v2.3.0 -> v2.4.0
executablebooks/mdformat repository patch 0.7.17 -> 0.7.21
lukka/run-cmake action minor v10.5 -> v10.8
lukka/run-cmake action minor v10.7 -> v10.8
pre-commit/mirrors-mypy repository minor v1.11.1 -> v1.14.1
pre-commit/pre-commit-hooks repository major v4.6.0 -> v5.0.0
pypa/cibuildwheel action minor v2.19 -> v2.22
python-jsonschema/check-jsonschema repository minor 0.29.1 -> 0.31.0

Note: The pre-commit manager in Renovate is not supported by the pre-commit maintainers or community. Please do not report any problems there, instead create a Discussion in the Renovate repository if you have any questions.

Release Notes

astral-sh/ruff-pre-commit (astral-sh/ruff-pre-commit)

v0.9.3

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See: https://github.com/astral-sh/ruff/releases/tag/0.9.3

v0.9.2

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See: https://github.com/astral-sh/ruff/releases/tag/0.9.2

v0.9.1

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See: https://github.com/astral-sh/ruff/releases/tag/0.9.1

v0.9.0

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See: https://github.com/astral-sh/ruff/releases/tag/0.9.0

v0.8.6

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See: https://github.com/astral-sh/ruff/releases/tag/0.8.6

v0.8.5

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See: https://github.com/astral-sh/ruff/releases/tag/0.8.5

v0.8.4

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See: https://github.com/astral-sh/ruff/releases/tag/0.8.4

v0.8.3

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See: https://github.com/astral-sh/ruff/releases/tag/0.8.3

v0.8.2

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See: https://github.com/astral-sh/ruff/releases/tag/0.8.2

v0.8.1

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See: https://github.com/astral-sh/ruff/releases/tag/0.8.1

v0.8.0

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See: https://github.com/astral-sh/ruff/releases/tag/0.8.0

v0.7.4

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See: https://github.com/astral-sh/ruff/releases/tag/0.7.4

v0.7.3

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See: https://github.com/astral-sh/ruff/releases/tag/0.7.3

v0.7.2

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See: https://github.com/astral-sh/ruff/releases/tag/0.7.2

v0.7.1

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See: https://github.com/astral-sh/ruff/releases/tag/0.7.1

v0.7.0

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See: https://github.com/astral-sh/ruff/releases/tag/0.7.0

v0.6.9

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See: https://github.com/astral-sh/ruff/releases/tag/0.6.9

v0.6.8

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See: https://github.com/astral-sh/ruff/releases/tag/0.6.8

v0.6.7

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See: https://github.com/astral-sh/ruff/releases/tag/0.6.7

v0.6.6

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See: https://github.com/astral-sh/ruff/releases/tag/0.6.6

v0.6.5

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See: https://github.com/astral-sh/ruff/releases/tag/0.6.5

v0.6.4

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See: https://github.com/astral-sh/ruff/releases/tag/0.6.4

v0.6.3

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See: https://github.com/astral-sh/ruff/releases/tag/0.6.3

v0.6.2

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See: https://github.com/astral-sh/ruff/releases/tag/0.6.2

v0.6.1

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See: https://github.com/astral-sh/ruff/releases/tag/0.6.1

v0.6.0

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See: https://github.com/astral-sh/ruff/releases/tag/0.6.0

v0.5.7

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See: https://github.com/astral-sh/ruff/releases/tag/0.5.7

codespell-project/codespell (codespell-project/codespell)

v2.4.0

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What's Changed
New Contributors

Full Changelog: codespell-project/codespell@v2.3.0...v2.4.0

executablebooks/mdformat (executablebooks/mdformat)

v0.7.21

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v0.7.20

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v0.7.19

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v0.7.18

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lukka/run-cmake (lukka/run-cmake)

v10.8: run-cmake@v10.8

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Changes:

  • Fix the matcher for the MSVC cl.exe compiler to account for the column (if present) of the error/warning location.

Note: to keep your workflow up to date with bug and security fixes, just use v10 branch to stay on the most recent v10.x version of this action, e.g., uses: lukka/run-cmake@v10

v10.7: run-cmake@v10.7

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Changes:

  • Update the action to require node v20, since v16 is out of support. If any problem occurs, please use run-cmake@v10.6and create an issue.
  • Update dependencies to most recent ones: all libs and @actions packages update to most recent versions, along with all other dependencies.
  • Drop usage of gulp.
  • Update docs.

Note: to keep your workflow up to date with bug and security fixes, just use v10 branch to stay on the most recent v10.x version of this action, e.g., uses: lukka/run-cmake@v10

v10.6: run-cmake@v10.6

Compare Source

Changes:

  • Since May 2023 the GitHub Runners for Windows contain Visual Studio 2022 17.6, whose VS Developer Command Prompt (or Developer Powershell) defines the VCPKG_ROOT value. The change is that the run-cmake action avoids changing the value of VCPKG_ROOT when setting up the MSVC environment.

Note: to keep your workflow up to date with bug and security fixes, just use v10 branch to stay on the most recent v10.x version of this action, e.g., uses: lukka/run-cmake@v10

pre-commit/mirrors-mypy (pre-commit/mirrors-mypy)

v1.14.1

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v1.14.0

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v1.13.0

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v1.12.1

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v1.12.0

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v1.11.2

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pre-commit/pre-commit-hooks (pre-commit/pre-commit-hooks)

v5.0.0: pre-commit-hooks v5.0.0

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Features
Fixes
Migrating
  • pre-commit-hooks now requires pre-commit>=3.2.0.
  • use non-deprecated names for stages.
pypa/cibuildwheel (pypa/cibuildwheel)

v2.22

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v2.21

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v2.20

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python-jsonschema/check-jsonschema (python-jsonschema/check-jsonschema)

v0.31.0

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  • Update vendored schemas: azure-pipelines, bamboo-spec, buildkite, circle-ci,
    dependabot, gitlab-ci, mergify, readthedocs, renovate, taskfile (2025-01-07)

  • Drop support for Python 3.8

  • Rename --format-regex to --regex-variant and convert
    --format-regex to a deprecated alias.
    It will be removed in a future release.

  • Regular expression interpretation in "pattern", "patternProperties", and
    "format": "regex" usages now uses unicode-mode JS regular expressions by
    default. (:issue:353)

    • Use --regex-variant nonunicode to get non-unicode JS regular
      expressions, the default behavior from previous versions.
    • Custom validators may be impacted by the new regular expression
      features. Validators are now always modified with the jsonschema
      library's extend() API to control the pattern and
      patternProperties keywords.

v0.30.0

Compare Source

  • Update vendored schemas: azure-pipelines, bitbucket-pipelines, buildkite,
    circle-ci, cloudbuild, dependabot, github-workflows, gitlab-ci, mergify,
    readthedocs, renovate, taskfile, woodpecker-ci (2024-11-29)
  • Fix caching behavior to always use URL hashes as cache keys. This fixes a
    cache confusion bug in which the wrong schema could be retrieved from the
    cache. This resolves :cve:2024-53848. Thanks :user:sethmlarson for reporting!
  • Deprecate the --cache-filename flag. It no longer has any effect and will
    be removed in a future release.

v0.29.4

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  • Update vendored schemas: azure-pipelines, github-workflows, gitlab-ci,
    mergify, renovate (2024-10-06)
  • Fix the renovate hook to allow for .renovaterc.json5 as well. Thanks
    :user:tpansino! (:pr:491)
  • Add Mergify schema and pre-commit hook. Thanks :user:hofbi and :user:jd
    for the issue and feedback! (:issue:487)

v0.29.3

Compare Source

  • Update vendored schemas: buildkite, circle-ci, dependabot, gitlab-ci,
    renovate, taskfile, woodpecker-ci (2024-09-29)

v0.29.2

Compare Source

  • Update vendored schemas: buildkite, github-workflows, gitlab-ci, renovate,
    woodpecker-ci (2024-08-22)
  • Convert from setup.cfg to pyproject.toml for python package metadata

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lan496 commented Jan 19, 2025

@LecrisUT The coverage CIs have started to break, and I think it does not directly relate to this PR. Do you know what is happening?
https://github.com/spglib/spglib/actions/runs/12854022155/job/35837946344?pr=522

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Thanks for looking into this PR. I was a bit wary of lcov-action because it uses a docker container approach and it seems we have 2 issues here:

  • lcov seems to recently complain if a pattern is not used
  • in the python run, it seems to look for numpy related headers which are never available because we are using build-isolation

Fixing these will be tricky I think, but instead I am considering one of the 2 options

  • codecov: remove the lcov-action and rely on codecov to extract all coverage data. We would need to migrate all exclusion flags to codecov.yaml 1. One downside of this I can think of right now is that it is harder to replicate locally and get a local report.
  • gcovr: this would be ci: Switch coverage to gcovr #403. This gives a bit more control over the exclusion paths and is more replicable locally. I don't remember what the issue was with that one, but it's worth re-exploring as the underlying tools evolve.

We could go with codecov approach for a quick solution for now and then see if #403 is still desirable.

I was looking at the format commit and I am quite surprised at the suggestion in the pre-commit because the original one is actually more correct. I'll open an issue upstream to see what's going on

Footnotes

  1. https://docs.codecov.com/docs/ignoring-paths ↩

@renovate renovate bot force-pushed the renovate/ci-and-devdependencies branch from 959e74e to e1b4937 Compare January 20, 2025 18:16
@renovate renovate bot force-pushed the renovate/ci-and-devdependencies branch from e1b4937 to 9133429 Compare January 24, 2025 07:09
@LecrisUT LecrisUT mentioned this pull request Jan 29, 2025
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I had time to debug the mdformat change and it's related to hukkin/mdformat#112, and it seems that they keep the brackets un-escapped if they are valid, e.g. like how GH accepts [this] without escaping. They seem fine, so I guess we keep them

@LecrisUT
Simplify lukka/run-cmake
12e6f39 
- outdated comment removed
- move back to v10 tracking
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renovate bot commented Jan 29, 2025

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Renovate will not automatically rebase this PR, because it does not recognize the last commit author and assumes somebody else may have edited the PR.

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codecov bot commented Jan 29, 2025 •
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Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 77.20%. Comparing base (e1d4fa1) to head (12e6f39).
Report is 59 commits behind head on develop.

Additional details and impacted files 
@@           Coverage Diff            @@
##           develop     #522   +/-   ##
========================================
  Coverage    77.20%   77.20%           
========================================
  Files           26       26           
  Lines         8082     8082           
  Branches      1697     1690    -7     
========================================
  Hits          6240     6240           
  Misses        1347     1347           
  Partials       495      495
Flag Coverage Δ
c_api 68.68% <ø> (ø)
fortran_api 50.70% <ø> (ø)
python_api 73.24% <ø> (ø)
unit_tests 11.67% <ø> (ø)

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LecrisUT commented Jan 29, 2025 •
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So... cibuildwheel runners for linux arm running with emulations seem to be broken. Let's see if #547 fixes it. (yeah it did)

@LecrisUT LecrisUT merged commit 12e6f39 into develop Jan 29, 2025
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@lan496 lan496 deleted the renovate/ci-and-devdependencies branch January 30, 2025 02:37
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