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@dependabot dependabot bot commented on behalf of github Mar 24, 2025

Bumps log from 0.4.26 to 0.4.27.

Release notes

Sourced from log's releases.

0.4.27

What's Changed

Full Changelog: rust-lang/log@0.4.26...0.4.27

Changelog

Sourced from log's changelog.

[0.4.27] - 2025-03-24

What's Changed

Full Changelog: rust-lang/log@0.4.26...0.4.27

Commits
  • 35161d0 Merge pull request #674 from rust-lang/cargo/0.4.27
  • cc131ef prepare for 0.4.27 release
  • ea6f54d Merge pull request #673 from rust-lang/feat/logger-by-ref
  • d229c73 fix unclosed code block
  • 02486e4 fill in more tests for logger argument
  • 71e034f expand logger tests
  • dfa067e fix up kv passing
  • 39d4c3a run fmt
  • 7aacc8f pass global logger by value, supplied logger by ref
  • a438c6e Merge pull request #664 from tisonkun/logger-field
  • Additional commits viewable in compare view

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@dependabot dependabot bot added dependencies Pull requests that update a dependency file rust labels Mar 24, 2025
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codecov bot commented Mar 24, 2025

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 88.01%. Comparing base (a7f409e) to head (f80f5f2).
Report is 51 commits behind head on latest.

Additional details and impacted files
@@            Coverage Diff             @@
##           latest    #3587      +/-   ##
==========================================
- Coverage   88.03%   88.01%   -0.02%     
==========================================
  Files         136      136              
  Lines       22275    22275              
  Branches     2225     2225              
==========================================
- Hits        19609    19606       -3     
- Misses       2353     2356       +3     
  Partials      313      313              
Flag Coverage Δ
hypothesis-py 25.43% <ø> (ø)
python 92.32% <ø> (ø)
rust 82.03% <ø> (-0.04%) ⬇️

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@ctb ctb enabled auto-merge (squash) March 25, 2025 14:47
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ctb commented Mar 25, 2025

@dependabot rebase

@dependabot dependabot bot force-pushed the dependabot/cargo/log-0.4.27 branch from 8b1cf94 to b2954ac Compare March 25, 2025 14:49
Bumps [log](https://github.com/rust-lang/log) from 0.4.26 to 0.4.27.
- [Release notes](https://github.com/rust-lang/log/releases)
- [Changelog](https://github.com/rust-lang/log/blob/master/CHANGELOG.md)
- [Commits](rust-lang/log@0.4.26...0.4.27)

---
updated-dependencies:
- dependency-name: log
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
@dependabot dependabot bot force-pushed the dependabot/cargo/log-0.4.27 branch from b2954ac to f80f5f2 Compare March 25, 2025 15:05
@ctb ctb merged commit 904564e into latest Mar 25, 2025
41 of 42 checks passed
@ctb ctb deleted the dependabot/cargo/log-0.4.27 branch March 25, 2025 15:24
ctb added a commit that referenced this pull request May 7, 2025
## [0.20.0] - 2025-05-06

MSRV: 1.74

Changes/additions:

* fully support skip-mers at the Python level; provide documentation
(#3627)
* remove support for python 3.10 (#3606)
* fix linear gather in Rust (#3605)
* impl full mem-based `RevIndex` in Rust, and add Python support for
mem- and disk-based `RevIndex` (#3545)
* Minhash deserialize hashfunction errorhandling (#3560)
* fix beta clippy errors (#3548)

Updates:

* Bump rand from 0.9.0 to 0.9.1 (#3620)
* Bump roaring from 0.10.10 to 0.10.12 (#3608)
* Bump log from 0.4.26 to 0.4.27 (#3587)
* Bump tempfile from 3.19.0 to 3.19.1 (#3588)
* Bump tempfile from 3.18.0 to 3.19.0 (#3582)
* Bump serde from 1.0.218 to 1.0.219 (#3576)
* Bump tempfile from 3.17.1 to 3.18.0 (#3575)
* Bump histogram from 0.11.2 to 0.11.3 (#3574)
* Bump serde_json from 1.0.139 to 1.0.140 (#3566)
* Bump getset from 0.1.4 to 0.1.5 (#3567)
* Bump needletail from 0.6.1 to 0.6.3 (#3553)
* Bump serde_json from 1.0.138 to 1.0.139 (#3552)
* Bump serde from 1.0.217 to 1.0.218 (#3550)
* Bump log from 0.4.25 to 0.4.26 (#3549)
* Bump tempfile from 3.16.0 to 3.17.1 (#3539)
ctb added a commit that referenced this pull request May 8, 2025
# sourmash v4.9.0 release notes

This release adds two significant feature sets to sourmash, without
introducing any breaking changes.

First, sourmash now fully supports fast, low-memory disk-based inverted
indexes based on RocksDB. This functionality has been part of [the
branchwater
plugin](https://github.com/sourmash-bio/sourmash_plugin_branchwater) for
a while, but it is now accessible via the sourmash command line and
Python API.

Second, we have added skip-mer sketching to sourmash, joining DNA,
protein, dayhoff, and hp encodings. Skip-mers allow more mismatches than
DNA k-mers and can be useful when comparing fast-evolving sequences such
as virus and phage genomes.

Documentation for the RocksDB indexes and skip-mer encodings is
available in the [command-line
docs](https://sourmash.readthedocs.io/en/latest/command-line.html).

Major new features:

* Fully support fast, low-memory RocksDB indexes in Python (#3545)
* Fully support skip-mers at the Python level; provide documentation
(#3627)
* Remove support for python 3.10 (#3606)

Cleanup and documentation updates:

* add default to `add_scaled_arg` in Python CLI utils (#3609)
* use `match/case` in `sourmash index` implementation (#3604)
* use single quotes inside sqlite statements (#3556)

Developer updates:

* implement manifest retrieval from Rust via FFI for `RevIndex` (#3630)
* make the RocksDB handle directly accessible to external code (#3468)
* fix linear gather in Rust (#3605)
* fix beta clippy errors (#3548)
* fix deprecations (#3613)
* update Makefile with 'offline', 'wheel' (#3579)
* update ubuntu image version for CI (#3623)
* Minhash deserialize hashfunction errorhandling (#3560)

Automated updates:

* Bump DeterminateSystems/nix-installer-action from 16 to 17 (#3626)
* Bump getset from 0.1.4 to 0.1.5 (#3567)
* Bump histogram from 0.11.2 to 0.11.3 (#3574)
* Bump log from 0.4.25 to 0.4.26 (#3549)
* Bump log from 0.4.26 to 0.4.27 (#3587)
* Bump needletail from 0.6.1 to 0.6.3 (#3553)
* Bump prefix-dev/setup-pixi from 0.8.1 to 0.8.2 (#3538)
* Bump prefix-dev/setup-pixi from 0.8.2 to 0.8.3 (#3551)
* Bump prefix-dev/setup-pixi from 0.8.3 to 0.8.4 (#3602)
* Bump prefix-dev/setup-pixi from 0.8.4 to 0.8.7 (#3616)
* Bump prefix-dev/setup-pixi from 0.8.7 to 0.8.8 (#3621)
* Bump pypa/cibuildwheel from 2.22.0 to 2.23.0 (#3564)
* Bump pypa/cibuildwheel from 2.23.0 to 2.23.1 (#3581)
* Bump pypa/cibuildwheel from 2.23.1 to 2.23.2 (#3603)
* Bump pypa/cibuildwheel from 2.23.2 to 2.23.3 (#3625)
* Bump rand from 0.9.0 to 0.9.1 (#3620)
* Bump roaring from 0.10.10 to 0.10.12 (#3608)
* Bump serde from 1.0.217 to 1.0.218 (#3550)
* Bump serde from 1.0.218 to 1.0.219 (#3576)
* Bump serde_json from 1.0.138 to 1.0.139 (#3552)
* Bump serde_json from 1.0.139 to 1.0.140 (#3566)
* Bump tempfile from 3.16.0 to 3.17.1 (#3539)
* Bump tempfile from 3.17.1 to 3.18.0 (#3575)
* Bump tempfile from 3.18.0 to 3.19.0 (#3582)
* Bump tempfile from 3.19.0 to 3.19.1 (#3588)
* Bump thiserror from 2.0.11 to 2.0.12 (#3565)
* pre-commit autoupdate (#3547)
* pre-commit autoupdate (#3563)
* pre-commit autoupdate (#3573)
* pre-commit autoupdate (#3580)
* pre-commit autoupdate (#3586)
* pre-commit autoupdate (#3607)
* pre-commit autoupdate (#3615)
* pre-commit autoupdate (#3619)
* pre-commit autoupdate (#3624)
* pre-commit autoupdate (#3633)
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