Bump roaring from 0.10.6 to 0.10.7 #3413
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Codecov ReportAll modified and coverable lines are covered by tests ✅
Additional details and impacted files@@ Coverage Diff @@
## latest #3413 +/- ##
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- Coverage 86.43% 86.43% -0.01%
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Files 137 137
Lines 16102 16103 +1
Branches 2219 2219
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Hits 13918 13918
- Misses 1877 1878 +1
Partials 307 307
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ctb
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Dec 5, 2024
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@dependabot rebase |
Bumps [roaring](https://github.com/RoaringBitmap/roaring-rs) from 0.10.6 to 0.10.7. - [Release notes](https://github.com/RoaringBitmap/roaring-rs/releases) - [Commits](RoaringBitmap/roaring-rs@v0.10.6...v0.10.7) --- updated-dependencies: - dependency-name: roaring dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com>
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Developer updates: * build: move ORCID to metadata in pyproject.toml, fix pixi (#3416) * build: simplify Rust release (#3392) * fix: Avoid re-calculating md5sum on clone and conversion to KmerMinHashBTree (#3385) * r0.15.1 release (#3304) * update sourmash core to r0.17.0 (#3381) * Added union method to HLL (#3293) * Build: upgrade to newer maturin (#3366) * CI: use supported ubuntu for codspeed (#3350) * Fix clippy lints from 1.83 beta (#3357) * Implement resumability for revindex (#3275) * add `Manifest::intersect_manifest` to Rust core (#3305) * bump sourmash core to r0.17.2 (#3399) * change `sig_from_record` to use scaled from `Record` to downsample (#3387) * derive Hash for `HashFunctions` (#3344) * enforce a single scaled on a `CollectionSet` (#3397) * fix formatting from #3306 (#3307) * have ruff ignore ipynb so as to avoid triggering an error during CI (#3325) * improve downsampling behavior on `KmerMinHash`; fix `RevIndex::gather` bug around `scaled`. (#3342) * panic when `FSStorage::load_sig` encounters more than one `Signature` in a JSON record (#3333) * propagate error from `RocksDB::open` on bad directory (#3306) * refactor `calculate_gather_stats` to disallow repeated downsampling (#3352) * release core r0.17.1 (#3388) * release sourmash rust core r0.16.0 (#3356) * standardize on u32 for scaled, and introduce `ScaledType` (#3364) * update plugin documentation for users (#3286) * update sourmash core to r0.15.2 (#3338) * when lingroups are provided, use them for `csv_summary` (#3311) * Misc Rust updates to core (#3297) * Resolve issue for high precision MLE estimation (#3296) Dependabot and pre-commit CI updates: * Bump DeterminateSystems/magic-nix-cache-action from 7 to 8 (#3319) * Bump DeterminateSystems/nix-installer-action from 13 to 14 (#3320) * Bump DeterminateSystems/nix-installer-action from 14 to 15 (#3374) * Bump DeterminateSystems/nix-installer-action from 15 to 16 (#3401) * Bump camino from 1.1.7 to 1.1.9 (#3301) * Bump codspeed-criterion-compat from 2.6.0 to 2.7.2 (#3324) * Bump conda-incubator/setup-miniconda from 3.0.4 to 3.1.0 (#3373) * Bump csv from 1.3.0 to 1.3.1 (#3390) * Bump getset from 0.1.2 to 0.1.3 (#3328) * Bump histogram from 0.11.0 to 0.11.1 (#3377) * Bump js-sys from 0.3.72 to 0.3.74 (#3412) * Bump memmap2 from 0.9.4 to 0.9.5 (#3326) * Bump myst-parser from 3.0.1 to 4.0.0 (#3277) * Bump needletail from 0.5.1 to 0.6.0 (#3376) * Bump pypa/cibuildwheel from 2.19.2 to 2.20.0 (#3278) * Bump pypa/cibuildwheel from 2.20.0 to 2.21.1 (#3332) * Bump pypa/cibuildwheel from 2.21.1 to 2.21.2 (#3345) * Bump pypa/cibuildwheel from 2.21.2 to 2.21.3 (#3353) * Bump pypa/cibuildwheel from 2.21.3 to 2.22.0 (#3408) * Bump roaring from 0.10.6 to 0.10.7 (#3413) * Bump serde from 1.0.204 to 1.0.207 (#3289) * Bump serde from 1.0.207 to 1.0.208 (#3298) * Bump serde from 1.0.208 to 1.0.209 (#3310) * Bump serde from 1.0.209 to 1.0.210 (#3318) * Bump serde from 1.0.210 to 1.0.214 (#3368) * Bump serde from 1.0.214 to 1.0.215 (#3403) * Bump serde_json from 1.0.120 to 1.0.121 (#3267) * Bump serde_json from 1.0.121 to 1.0.122 (#3280) * Bump serde_json from 1.0.122 to 1.0.124 (#3288) * Bump serde_json from 1.0.124 to 1.0.125 (#3302) * Bump serde_json from 1.0.125 to 1.0.127 (#3309) * Bump serde_json from 1.0.127 to 1.0.128 (#3316) * Bump serde_json from 1.0.128 to 1.0.132 (#3358) * Bump serde_json from 1.0.132 to 1.0.133 (#3402) * Bump sphinx-design from 0.5.0 to 0.6.0 (#3268) * Bump sphinx-design from 0.6.0 to 0.6.1 (#3276) * Bump tempfile from 3.10.1 to 3.11.0 (#3279) * Bump tempfile from 3.11.0 to 3.12.0 (#3287) * Bump tempfile from 3.12.0 to 3.13.0 (#3340) * Bump tempfile from 3.13.0 to 3.14.0 (#3391) * Bump thiserror from 1.0.63 to 1.0.64 (#3335) * Bump thiserror from 1.0.64 to 1.0.65 (#3367) * Bump thiserror from 1.0.65 to 1.0.68 (#3379) * Bump thiserror from 1.0.68 to 2.0.3 (#3389) * Bump web-sys from 0.3.69 to 0.3.70 (#3299) * Bump web-sys from 0.3.70 to 0.3.72 (#3354) * Bump web-sys from 0.3.72 to 0.3.74 (#3411) * Update pytest-cov requirement from <6.0,>=4 to >=4,<7.0 (#3375) * Update sphinx requirement from <8,>=6 to >=6,<9 (#3269) * Upgrade rocksdb to 0.22.0, bump MSRV to 1.66 (#3383) * [pre-commit.ci] pre-commit autoupdate (#3281) * [pre-commit.ci] pre-commit autoupdate (#3290) * [pre-commit.ci] pre-commit autoupdate (#3312) * [pre-commit.ci] pre-commit autoupdate (#3330) * [pre-commit.ci] pre-commit autoupdate (#3336) * [pre-commit.ci] pre-commit autoupdate (#3341) * [pre-commit.ci] pre-commit autoupdate (#3346) * [pre-commit.ci] pre-commit autoupdate (#3360) * [pre-commit.ci] pre-commit autoupdate (#3369) * [pre-commit.ci] pre-commit autoupdate (#3380) * [pre-commit.ci] pre-commit autoupdate (#3393) * [pre-commit.ci] pre-commit autoupdate (#3404) * [pre-commit.ci] pre-commit autoupdate (#3409) * [pre-commit.ci] pre-commit autoupdate (#3414)
ctb
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Dec 20, 2024
## [0.18.0] - 2024-12-20 MSRV: 1.66 Changes/additions: * add skipmer capacity to sourmash python layer via ffi (#3446) * add skipmers; switch to reading frame approach for translation, skipmers (#3395) * Refactor: Use to_writer/from_reader across the codebase (#3443) * adjust `Signature::name()` to return `Option<String>` instead of `filename()` and `md5sum()` (#3434) * propagate zipfile errors (#3431) Updates: * Bump proptest from 1.5.0 to 1.6.0 (#3437) * Bump roaring from 0.10.8 to 0.10.9 (#3438) * Bump serde from 1.0.215 to 1.0.216 (#3436) * Bump statrs from 0.17.1 to 0.18.0 (#3426) * Bump roaring from 0.10.7 to 0.10.8 (#3423) * Bump needletail from 0.6.0 to 0.6.1 (#3427) * Bump web-sys from 0.3.72 to 0.3.74 (#3411) * Bump js-sys from 0.3.72 to 0.3.74 (#3412) * Bump roaring from 0.10.6 to 0.10.7 (#3413) * Bump serde_json from 1.0.132 to 1.0.133 (#3402) * Bump serde from 1.0.214 to 1.0.215 (#3403)
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Bumps roaring from 0.10.6 to 0.10.7.
Release notes
Sourced from roaring's releases.
Commits
f532063Merge pull request #300 from RoaringBitmap/bump-release-0-10-750763bfBump version to v0.10.7d491df6Merge pull request #297 from Dr-Emann/push-yyvkswtzunrm50eda41implement range based iterationb16c016Merge pull request #289 from RoaringBitmap/clone-iter-slice06f3578Bump MSRV to 1.71.1a27587fAdd more documentation to the ArrayStore capacity method2d1a330Make sure not to overflow values in the the Statisticsf8e5aebMake the Statistics struct non exhaustivef3e289dIntroduce the Statistics data structureDependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting
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