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Roadmap to v0.4.4

Status: Open.

Task

#563 In showyourwork/showyourwork;

· HealthyPear opened on Aug 11, 2025

· 

v0.4.4

Checkout zenopy as a replacement for our interface to Zenodo

💡 ideasIdeas that could use some discussionIdeas that could use some discussion

✋ contributions welcomePlease consider contributingPlease consider contributing

🚚 infrastructureRelated to core software or CI infrastructureRelated to core software or CI infrastructure

zenodo

Status: Open.

#520 In showyourwork/showyourwork;

· HealthyPear opened on Jan 27, 2025

[Bug]: Usual help option "-h" is applied to snakemake and not to showyourwork

🐛 bugSomething isn't workingSomething isn't working

CLIIssues related to the Command-Line InterfaceIssues related to the Command-Line Interface

Status: Open.

#516 In showyourwork/showyourwork;

· HealthyPear opened on Jan 26, 2025

· 

v0.4.4

Some remote integration tests are failing

🐛 bugSomething isn't workingSomething isn't working

🧪 testingRelated to code testingRelated to code testing

Status: Open.

Bug

#512 In showyourwork/showyourwork;

· HealthyPear opened on Jan 14, 2025

Why build branch on push when we already build a PR?

⏰ waiting for more infoFurther information is requestedFurther information is requested

remote

Status: Open.

#509 In showyourwork/showyourwork;

· HealthyPear opened on Jan 9, 2025

Update the cookiecutter template to fix known issues #435 and #505 automatically

known issueAn long-standing issue reported in the docsAn long-standing issue reported in the docs

Status: Open.

#507 In showyourwork/showyourwork;

· HealthyPear opened on Jan 9, 2025

· 

v0.4.4

Allow \script to use different environments per figure

⬆️ enhancementNew feature or requestNew feature or request

💡 ideasIdeas that could use some discussionIdeas that could use some discussion

Status: Open.

Feature

#499 In showyourwork/showyourwork;

· HealthyPear opened on Dec 2, 2024

showyourwork CLI should be able to handle snakemake stale locks

CLIIssues related to the Command-Line InterfaceIssues related to the Command-Line Interface

Status: Open.

#463 In showyourwork/showyourwork;

· HealthyPear opened on Jul 30, 2024

· 

v0.4.4

Alternative way to run remote tests

Status: Open.

#459 In showyourwork/showyourwork;

· HealthyPear opened on May 24, 2024

snakemake "all" rule and showyourwork

Status: Open.

#455 In showyourwork/showyourwork;

· HealthyPear opened on May 20, 2024

--cleanup-metadata is not a showyourwork command

CLIIssues related to the Command-Line InterfaceIssues related to the Command-Line Interface

Status: Open.

#453 In showyourwork/showyourwork;

· HealthyPear opened on May 3, 2024

Support for dynamic imports from user-defined modules

Status: Open.

#452 In showyourwork/showyourwork;

· HealthyPear opened on Apr 30, 2024