HBCD changes - [FEATURE REQUEST] - multiple functions - Helge Zöllner #424
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This commit includes numerous changes needed for the HBCD processing. See details below: - osp_fitInitialise.m had a wrong path for the GE HERCULES basis set - Fixed typo and wrong setup of the cell array for external segmentation files when .json files where used in OspreyJob.m - Changed the reference/reporter signal for the linewidth and SNR to creatine for all sequences with changes in op_get_Mutlispectra_LW,m, op_get_Multispectra_SNR.m, OspreyHTMLReport.m, OspreyMinReport.m, and OspreyProcess.m - Fixed a bug related to the linewidth calculation of creatine for HERMES/HERCULES data related to the included frequency range for the simple FWHM calculation - Added a quick summary to the HTML report showing quality measures (LW, SNR, fit residual), all fits, and localization + segmentation (if available) - Added segmentation based on anatomical labels. This works for HBCD atlas only
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This commit includes numerous changes needed for the HBCD processing. See details below:
osp_fitInitialise.m had a wrong path for the GE HERCULES basis set
Fixed typo and wrong setup of the cell array for external segmentation files when .json files where used in OspreyJob.m
Changed the reference/reporter signal for the linewidth and SNR to creatine for all sequences with changes in op_get_Mutlispectra_LW,m, op_get_Multispectra_SNR.m, OspreyHTMLReport.m, OspreyMinReport.m, and OspreyProcess.m
Fixed a bug related to the linewidth calculation of creatine for HERMES/HERCULES data related to the included frequency range for the simple FWHM calculation
Added a quick summary to the HTML report showing quality measures (LW, SNR, fit residual), all fits, and localization + segmentation (if available)
Added segmentation based on anatomical labels. This works for HBCD atlas only