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sbt 1.9.8 can't boot due to java.lang.UnsatisfiedLinkError w/ JDK 8 + CentOS 7 or Rocky Linux 8 (x64) #7463

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sbt 1.9.8 can't boot due to java.lang.UnsatisfiedLinkError w/ JDK 8 + CentOS 7 or Rocky Linux 8 (x64)#7463
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BugRegressionarea/linuxLinux distro related issues
Milestone
1.9.9
@mayth

Description

@mayth
mayth
opened on Dec 14, 2023

steps

I'm working with Docker. The host's environment is:

  • CPU: Apple M1 Max
  • OS: macOS Sonoma 14.2
  • Docker: Desktop 4.26.0, Engine 24.0.7

Dockerfile:

ARG base_image=centos:7
FROM $base_image

ARG jdk_version=8
ARG jdk_arch=x64
ARG jdk_platform=linux
ARG sbt_version=1.9.8

# setup java
ADD ./install_jdk.sh .
RUN ./install_jdk.sh ${jdk_version} ${jdk_arch} ${jdk_platform}
ENV JAVA_HOME /opt/jdk-${jdk_version}
ENV PATH $PATH:$JAVA_HOME/bin
# check installation
RUN java -version

RUN set -o pipefail && \
    curl -q -L -o /etc/yum.repos.d/sbt-rpm.repo https://www.scala-sbt.org/sbt-rpm.repo && \
    yum install -q -y sbt-${sbt_version}

RUN mkdir /app
WORKDIR /app

ENTRYPOINT ["/bin/bash"]

(install_jdk.sh is a script that installs Adoptium Temurin JDK to /opt/jdk-${jdk_version} using the latest official release archive. I uploaded it to gist: https://gist.github.com/mayth/12b20e6439e11c7f1ec1cb68a8d09d81)

Build an image, start a container and run sbt in it.

$ docker build --platform linux/x86_64 --build-arg base_image=centos:7 --build-arg jdk_version=8 --build-arg jdk_arch=x64 sbt_version=1.9.8 -t sbt1.9.8-centos7-jdk8
$ docker run -it --rm --platform linux/x86_64 sbt1.9.8-centos7-jdk8 /usr/bin/sbt -batch sbtVersion

problem

Launching sbt fails with java.lang.UnsatisfiedLinkError: Error looking up function 'stat': java: undefined symbol: stat.

As far as I tested, the same issue occurred on Rocky Linux 8 (--build-arg base_image=rockylinux:8).

$ docker run -it --rm --platform linux/x86_64 sbt1.9.8-centos7-jdk8 /usr/bin/sbt -batch sbtVersion
downloading sbt launcher 1.9.8
[info] [launcher] getting org.scala-sbt sbt 1.9.8  (this may take some time)...
[info] [launcher] getting Scala 2.12.18 (for sbt)...
java.lang.UnsatisfiedLinkError: Error looking up function 'stat': java: undefined symbol: stat
	at com.sun.jna.Function.<init>(Function.java:252)
	at com.sun.jna.NativeLibrary.getFunction(NativeLibrary.java:620)
	at com.sun.jna.NativeLibrary.getFunction(NativeLibrary.java:596)
	at com.sun.jna.NativeLibrary.getFunction(NativeLibrary.java:582)
	at com.sun.jna.Library$Handler.invoke(Library.java:248)
	at com.sun.proxy.$Proxy2.stat(Unknown Source)
	at sbt.internal.io.Linux64Milli$.$anonfun$getModifiedTimeNative$1(Milli.scala:215)
	at sbt.internal.io.MilliPosixBase.checkedIO(Milli.scala:100)
	at sbt.internal.io.Linux64Milli$.getModifiedTimeNative(Milli.scala:215)
	at sbt.internal.io.Linux64Milli$.getModifiedTimeNative(Milli.scala:210)
	at sbt.internal.io.MilliNative.getModifiedTime(Milli.scala:65)
	at sbt.internal.io.Milli$.getModifiedTime(Milli.scala:387)
	at sbt.io.IO$.$anonfun$getModifiedTimeOrZero$1(IO.scala:1436)
	at sbt.internal.io.Retry$.apply$mJc$sp(Retry.scala:47)
	at sbt.internal.io.Retry$.apply$mJc$sp(Retry.scala:29)
	at sbt.internal.io.Retry$.apply$mJc$sp(Retry.scala:24)
	at sbt.io.IO$.getModifiedTimeOrZero(IO.scala:1436)
	at sbt.internal.classpath.ClassLoaderCache$Key$$anonfun$$lessinit$greater$3.apply(ClassLoaderCache.scala:59)
	at sbt.internal.classpath.ClassLoaderCache$Key$$anonfun$$lessinit$greater$3.apply(ClassLoaderCache.scala:59)
	at scala.collection.immutable.List.map(List.scala:293)
	at sbt.internal.classpath.ClassLoaderCache$Key.<init>(ClassLoaderCache.scala:59)
	at sbt.internal.classpath.ClassLoaderCache$Key.<init>(ClassLoaderCache.scala:60)
	at sbt.internal.classpath.ClassLoaderCache.cachedCustomClassloader(ClassLoaderCache.scala:195)
	at sbt.State$StateOpsImpl$.initializeClassLoaderCache$extension(State.scala:417)
	at sbt.StandardMain$.initialState(Main.scala:286)
	at sbt.xMain$.$anonfun$run$11(Main.scala:128)
	at scala.util.DynamicVariable.withValue(DynamicVariable.scala:62)
	at scala.Console$.withIn(Console.scala:230)
	at sbt.internal.util.Terminal$.withIn(Terminal.scala:610)
	at sbt.internal.util.Terminal$.$anonfun$withStreams$1(Terminal.scala:390)
	at scala.util.DynamicVariable.withValue(DynamicVariable.scala:62)
	at scala.Console$.withOut(Console.scala:167)
	at sbt.internal.util.Terminal$.$anonfun$withOut$2(Terminal.scala:600)
	at scala.util.DynamicVariable.withValue(DynamicVariable.scala:62)
	at scala.Console$.withErr(Console.scala:196)
	at sbt.internal.util.Terminal$.withOut(Terminal.scala:600)
	at sbt.internal.util.Terminal$.withStreams(Terminal.scala:390)
	at sbt.xMain$.withStreams$1(Main.scala:88)
	at sbt.xMain$.run(Main.scala:123)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
	at java.lang.reflect.Method.invoke(Method.java:498)
	at sbt.internal.XMainConfiguration.run(XMainConfiguration.java:59)
	at sbt.xMain.run(Main.scala:47)
	at xsbt.boot.Launch$.$anonfun$run$1(Launch.scala:149)
	at xsbt.boot.Launch$.withContextLoader(Launch.scala:176)
	at xsbt.boot.Launch$.run(Launch.scala:149)
	at xsbt.boot.Launch$.$anonfun$apply$1(Launch.scala:44)
	at xsbt.boot.Launch$.launch(Launch.scala:159)
	at xsbt.boot.Launch$.apply(Launch.scala:44)
	at xsbt.boot.Launch$.apply(Launch.scala:21)
	at xsbt.boot.Boot$.runImpl(Boot.scala:78)
	at xsbt.boot.Boot$.run(Boot.scala:73)
	at xsbt.boot.Boot$.main(Boot.scala:21)
	at xsbt.boot.Boot.main(Boot.scala)
[error] [launcher] error during sbt launcher: java.lang.UnsatisfiedLinkError: Error looking up function 'stat': java: undefined symbol: stat

expectation

sbt should be successfully launched.

notes

  • sbt 1.9.7 has no issue in the same condition.
  • using Rocky Linux 9 (base=rockylinux:9) solves this problem.
  • using JDK 11+ also solves this problem.
  • on aarch64 this problem doesn't occur.

This seems to be related with sbt/io#362 and #7455. As was done in #7455 (comment), I checked the symbol table of libc. I found that there is stat in Rocky Linux 9 but not so in Rocky Linux 8. Rocky Linux 8 and 9 use glibc-2.28 and glibc-2.34 respectively.

In rockylinux:8 image (glibc-2.28):

$ readelf -s /lib64/ld-2.28.so | grep stat
     2: 00000000000159d0    25 FUNC    GLOBAL DEFAULT   12 _dl_get_tls_static_info@@GLIBC_PRIVATE
    24: 00000000000071c0     5 FUNC    GLOBAL DEFAULT   12 _dl_debug_state@@GLIBC_PRIVATE
    39: 0000000000230040     4 OBJECT  LOCAL  DEFAULT   22 dl_close_state.11248
   228: 000000000001df30   520 FUNC    LOCAL  DEFAULT   12 print_statistics_item
   229: 000000000001e140   531 FUNC    LOCAL  DEFAULT   12 print_statistics
   268: 0000000000000000     0 FILE    LOCAL  DEFAULT  ABS dl-fxstatat64.c
   285: 0000000000000000     0 FILE    LOCAL  DEFAULT  ABS xstat.c
   286: 0000000000000000     0 FILE    LOCAL  DEFAULT  ABS fxstat.c
   287: 0000000000000000     0 FILE    LOCAL  DEFAULT  ABS lxstat.c
   323: 0000000000023990    80 FUNC    LOCAL  DEFAULT   12 __GI___lxstat
   360: 00000000000122e0   289 FUNC    LOCAL  DEFAULT   12 _dl_try_allocate_static_t
   380: 0000000000012450    67 FUNC    LOCAL  DEFAULT   12 _dl_nothread_init_static_
   383: 0000000000023990    80 FUNC    LOCAL  DEFAULT   12 _lxstat
   384: 0000000000023900    80 FUNC    LOCAL  DEFAULT   12 _xstat
   389: 0000000000023900    80 FUNC    LOCAL  DEFAULT   12 __xstat64
   401: 0000000000023950    64 FUNC    LOCAL  DEFAULT   12 __GI___fxstat
   409: 0000000000023900    80 FUNC    LOCAL  DEFAULT   12 __GI___xstat64
   413: 0000000000023990    80 FUNC    LOCAL  DEFAULT   12 __lxstat
   419: 0000000000023900    80 FUNC    LOCAL  DEFAULT   12 __GI___xstat
   458: 0000000000023470    80 FUNC    LOCAL  DEFAULT   12 __fxstatat
   481: 0000000000023470    80 FUNC    LOCAL  DEFAULT   12 __fxstatat64
   496: 0000000000023470    80 FUNC    LOCAL  DEFAULT   12 __GI___fxstatat64
   507: 0000000000012410    51 FUNC    LOCAL  DEFAULT   12 _dl_allocate_static_tls
   523: 0000000000023950    64 FUNC    LOCAL  DEFAULT   12 __GI___fxstat64
   526: 0000000000023990    80 FUNC    LOCAL  DEFAULT   12 __lxstat64
   551: 0000000000023950    64 FUNC    LOCAL  DEFAULT   12 __fxstat64
   554: 0000000000023900    80 FUNC    LOCAL  DEFAULT   12 __xstat
   560: 0000000000023950    64 FUNC    LOCAL  DEFAULT   12 _fxstat
   563: 00000000000071c0     5 FUNC    LOCAL  DEFAULT   12 __GI__dl_debug_state
   570: 0000000000023950    64 FUNC    LOCAL  DEFAULT   12 __fxstat
   571: 0000000000023990    80 FUNC    LOCAL  DEFAULT   12 __GI___lxstat64
   611: 0000000000015600   140 FUNC    LOCAL  DEFAULT   12 _dl_tls_static_surplus_in
   631: 00000000000159d0    25 FUNC    GLOBAL DEFAULT   12 _dl_get_tls_static_info
   633: 00000000000071c0     5 FUNC    GLOBAL DEFAULT   12 _dl_debug_state

In rockylinux:9 (glibc-2.34):

# readelf -s /lib64/ld-linux-x86-64.so.2  | grep stat
    40: 0000000000037060     4 OBJECT  LOCAL  DEFAULT   22 dl_close_state.2
   235: 0000000000020fc0   536 FUNC    LOCAL  DEFAULT   13 print_statistics_item
   236: 00000000000211e0   533 FUNC    LOCAL  DEFAULT   13 print_statistics
   291: 0000000000000000     0 FILE    LOCAL  DEFAULT  ABS stat64.c
   292: 0000000000000000     0 FILE    LOCAL  DEFAULT  ABS fstat64.c
   293: 0000000000000000     0 FILE    LOCAL  DEFAULT  ABS lstat64.c
   294: 0000000000000000     0 FILE    LOCAL  DEFAULT  ABS fstatat64.c
   326: 00000000000270d0    48 FUNC    LOCAL  DEFAULT   13 __GI___fstat64
   334: 0000000000027120    46 FUNC    LOCAL  DEFAULT   13 fstatat
   345: 00000000000270b0    22 FUNC    LOCAL  DEFAULT   13 stat64
   391: 00000000000270b0    22 FUNC    LOCAL  DEFAULT   13 __stat
   401: 0000000000027120    46 FUNC    LOCAL  DEFAULT   13 __fstatat
   425: 0000000000027100    25 FUNC    LOCAL  DEFAULT   13 __lstat64
   428: 00000000000270d0    48 FUNC    LOCAL  DEFAULT   13 fstat64
   438: 00000000000270b0    22 FUNC    LOCAL  DEFAULT   13 __stat64
   457: 00000000000270d0    48 FUNC    LOCAL  DEFAULT   13 fstat
   485: 0000000000027100    25 FUNC    LOCAL  DEFAULT   13 lstat
   505: 0000000000027100    25 FUNC    LOCAL  DEFAULT   13 lstat64
   541: 0000000000027100    25 FUNC    LOCAL  DEFAULT   13 __GI___lstat64
   550: 0000000000027120    46 FUNC    LOCAL  DEFAULT   13 fstatat64
   560: 00000000000270d0    48 FUNC    LOCAL  DEFAULT   13 __fstat64
   566: 00000000000176d0   300 FUNC    LOCAL  DEFAULT   13 _dl_init_static_tls
   580: 00000000000270b0    22 FUNC    LOCAL  DEFAULT   13 stat
   581: 0000000000027120    46 FUNC    LOCAL  DEFAULT   13 __fstatat64
   592: 00000000000270b0    22 FUNC    LOCAL  DEFAULT   13 __GI___stat64
   596: 0000000000008300     5 FUNC    LOCAL  DEFAULT   13 __GI__dl_debug_state
   609: 00000000000270d0    48 FUNC    LOCAL  DEFAULT   13 __fstat
   612: 0000000000027100    25 FUNC    LOCAL  DEFAULT   13 __lstat
   624: 0000000000027120    46 FUNC    LOCAL  DEFAULT   13 __GI___fstatat
   640: 0000000000027120    46 FUNC    LOCAL  DEFAULT   13 __GI___fstatat64
   649: 0000000000016a80   144 FUNC    LOCAL  DEFAULT   13 _dl_tls_static_s[...]
   668: 0000000000016e40    25 FUNC    GLOBAL DEFAULT   13 _dl_get_tls_stat[...]
   671: 0000000000008300     5 FUNC    GLOBAL DEFAULT   13 _dl_debug_state

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