Skip to content

paoloshasta/shasta

 
 

Repository files navigation

Shasta long read assembler

De novo assembler for long reads, optimized for Oxford Nanopore (ONT) reads.

For quick start information see here.

The complete user documentation is available here.

Please file GitHub issues to report problems, request help, or ask questions. Please keep each issue on a single topic when possible.

About

De novo assembly from Oxford Nanopore reads.

Resources

License

Contributing

Stars

Watchers

Forks

Languages

  • C++ 97.9%
  • Python 1.8%
  • Other 0.3%