Search results

How to quantify novel transcripts

Status: Open.

#496 In pachterlab/kallisto;

· MR-D-CJ opened on Aug 18, 2025

Kmer size in Kallisto Index

Status: Open.

#494 In pachterlab/kallisto;

· Anupriya014 opened on Aug 7, 2025

Can bifrost be unbundled?

Status: Open.

#491 In pachterlab/kallisto;

· outpaddling opened on May 27, 2025

Mapping rate difference between long and short reads

Status: Open.

#489 In pachterlab/kallisto;

· linley-sherin opened on May 14, 2025

Compilation failure with clang 19

Status: Open.

#488 In pachterlab/kallisto;

· outpaddling opened on May 14, 2025

Kallisto RNA velocity indices

Status: Open.

#486 In pachterlab/kallisto;

· willy870708 opened on Apr 18, 2025

.h5 file generation

Status: Open.

#485 In pachterlab/kallisto;

· altarrf opened on Apr 17, 2025

⬆️ Request: Update apt package to latest release (v0.51.1)

Status: Open.

#484 In pachterlab/kallisto;

· BenjaminDEMAILLE opened on Mar 23, 2025

Enable BAM/CRAM support (-DUSE_BAM=ON) by default in Homebrew and general builds

Status: Open.

#483 In pachterlab/kallisto;

· BenjaminDEMAILLE opened on Mar 23, 2025

Large mismatches between unique TCC counts and estimated counts for transcripts with very large abundances in lr-kallisto

Status: Open.

#482 In pachterlab/kallisto;

· dnwissel opened on Mar 9, 2025

Can lr-kallisto be used for long-read metagenomics data?

Status: Open.

#480 In pachterlab/kallisto;

· zhaizhaoyu98 opened on Feb 20, 2025

index sizes in recent kallisto

Status: Open.

#478 In pachterlab/kallisto;

· ajggit opened on Jan 30, 2025