Fix crash with report generation on namespace packages (again) #16019
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Diff from mypy_primer, showing the effect of this PR on open source code: vision (https://github.com/pytorch/vision): typechecking got 1.38x slower (36.7s -> 50.6s)
(Performance measurements are based on a single noisy sample)
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Fixes #15979. Fix is similar to that in
iterate_python_lines.