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plex_init handles kwarg relative filepaths #568

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Merged
merged 1 commit into from
Aug 4, 2023
Merged

plex_init handles kwarg relative filepaths #568

merged 1 commit into from
Aug 4, 2023

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acashmoney
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@acashmoney acashmoney linked an issue Aug 3, 2023 that may be closed by this pull request
[LAB-389] PLEX_INIT does not handle relative filepaths #560
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linear bot commented Aug 3, 2023

LAB-389 PLEX_INIT does not handle relative filepaths 

from plex import CoreTools, plex_init


initial_io_cid = plex_init(

 CoreTools.EQUIBIND.value,

 protein="/content/6d08_protein_processed.pdb",

 small_molecule="/content/6d08_ligand.sdf",

)

This code does not run in my hands - is there an obvious error?

https://colab.research.google.com/drive/15nZrm5k9fMdAHfzpR1g_8TPIz9qgRoys?usp=sharing#scrollTo=ZT2weQliNeGX

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thetechnocrat-dev
thetechnocrat-dev approved these changes Aug 4, 2023
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matrix_bug_vs_feature

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I'll fix the go single "/" edge case in a separate PR.

@acashmoney acashmoney merged commit 254da28 into main Aug 4, 2023
@acashmoney acashmoney deleted the 560-lab-389-plex_init-does-not-handle-relative-filepaths branch August 4, 2023 14:20
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[LAB-389] PLEX_INIT does not handle relative filepaths
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