CytoCave is an immersive interactive online visualization platform based on the NeuroCave connectome visualization application, but modified and optimized for general -omics network visualization. CytoCave leverages existing features of NeuroCave— including the side-by-side viewports designed for freeform exploration of node- link diagrams under various transformations or coordinate system embeddings, as well its immersive capabilities— while adding a range of new features that facilitate the exploration of general multi- omics network data using dimensionality reduction projection of high-dimensional biological data with cluster membership highlighting, as well as scalability upgrades to support visualizing and interacting with large scale proteomics and multi-omics data.

CytoCave was developed for the IEEE 2023 Bio+MedVis Challenge. (http://biovis.net/2023/biovisChallenges_vis).

Live Demo of CytoCave with Bio+MedVis Challenge Data: https://src.dogstarlabs.com/morris/CytoCave/visualization.html?dataset=BioVisIEEE2023&load=0&neuro=0&lut=BioMedVis2023drugs2f

Short Video introducing the main features of CytoCave

For more detaila about NeuroCave, which CytoCave is based on, click here: https://creativecodinglab.github.io/NeuroCave/