Search results

Only-tumor annotation?

Status: Open.

#335 In hall-lab/svtools;

· jgarces02 opened on Aug 28, 2025

svtools classify: KeyError: 'CN'

Status: Open.

#334 In hall-lab/svtools;

· hxhkgua opened on Jan 18, 2025

sv.vcf.gz

Status: Open.

#333 In hall-lab/svtools;

· ghost opened on Jan 16, 2025

GT:CN ./.:309.986

Status: Open.

#332 In hall-lab/svtools;

· pingxinxing opened on Jul 24, 2024

[E::vcf_parse_format] Incorrect number of FORMAT fields at chrxxxx

Status: Open.

#331 In hall-lab/svtools;

· pingxinxing opened on Jun 16, 2024

vcftobedpe does not give strandedness for MANTA Outputs

Status: Open.

#330 In hall-lab/svtools;

· think-o opened on Jun 12, 2024

svtools copynumber:Can't find directory 'bin_1000'.

Status: Open.

#329 In hall-lab/svtools;

· pingxinxing opened on Jun 3, 2024

svtools lsort KeyError: 'CIPOS'

Status: Open.

#328 In hall-lab/svtools;

· hcsun1 opened on Apr 12, 2024

Assistance Needed with svtools lsort - No Output Generated

Status: Open.

#327 In hall-lab/svtools;

· karen916 opened on Dec 15, 2023

svtools afreq KeyError: 'SQ' in

Status: Open.

#326 In hall-lab/svtools;

· shameem356 opened on Jun 19, 2023

ValueError: max() arg is an empty sequence

Status: Open.

#325 In hall-lab/svtools;

· Hubuyan opened on Apr 10, 2023

bedpetovcf does not work with vcftobedpe output as input

Status: Open.

#324 In hall-lab/svtools;

· anoronh4 opened on Jun 3, 2022