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I enabled updateRefs last week to see if that would improve stacking PR's using normal git operations.

I didn't really think about it anymore, until I noticed a lot of my git town sync's started to mess up my branches completely.

Every time I did a rebase, I would fix commits that were also in other branches, and those were messed up too.

I guess that's the goal of updateRefs. But I would say it does not work nicely with Git town.

Maybe it would be good to add some tests for this, to see how it affects syncing, and maybe warn users about this.