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@ga4gh

Global Alliance for Genomics and Health

An international coalition, formed to enable the sharing of genomic and clinical data.

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  1. ga4gh-schemas ga4gh-schemas Public archive

    Models and APIs for Genomic data. RETIRED 2018-01-24

    Python 218 112

  2. benchmarking-tools benchmarking-tools Public

    Repository for the GA4GH Benchmarking Team work developing standardized benchmarking methods for germline small variant calls

    HTML 203 47

  3. ga4gh-server ga4gh-server Public archive

    Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24

    Python 98 91

  4. vrs vrs Public

    Extensible specification for representing and uniquely identifying biological sequence variation

    Jupyter Notebook 92 38

  5. task-execution-schemas task-execution-schemas Public

    89 30

  6. workflow-execution-service-schemas workflow-execution-service-schemas Public

    The WES API is a standard way to run and manage portable workflows.

    85 38

Repositories

Showing 10 of 132 repositories
  • TASC Public

    TASC aids the harmonisation of aspects of GA4GH's various products that would otherwise prevent different products from being used together conveniently.

    ga4gh/TASC’s past year of commit activity
    10 9 22 (1 issue needs help) 2 Updated Aug 14, 2025
  • cat-vrs-python Public

    GA4GH Categorical Variation Representation Python Implementation

    ga4gh/cat-vrs-python’s past year of commit activity
    Python 1 Apache-2.0 3 3 0 Updated Aug 13, 2025
  • vrs-python Public

    GA4GH Variation Representation Python Implementation

    ga4gh/vrs-python’s past year of commit activity
    Python 58 Apache-2.0 33 61 (1 issue needs help) 9 Updated Aug 13, 2025
  • quality-control-wgs Public

    GA4GH Quality Control of Whole Genome Sequencing's metrics definition, benchmark resources and reference implementations

    ga4gh/quality-control-wgs’s past year of commit activity
    Jupyter Notebook 19 Apache-2.0 5 4 1 Updated Aug 13, 2025
  • va-spec Public

    An information model for representing variant annotations.

    ga4gh/va-spec’s past year of commit activity
    Jupyter Notebook 21 Apache-2.0 6 108 (1 issue needs help) 3 Updated Aug 11, 2025
  • data-repository-service-schemas Public

    A repository for the schemas used for the Data Repository Service.

    ga4gh/data-repository-service-schemas’s past year of commit activity
    62 Apache-2.0 54 69 23 Updated Aug 1, 2025
  • va-spec-python Public

    GA4GH Variation Annotation Python Implementation

    ga4gh/va-spec-python’s past year of commit activity
    Python 1 Apache-2.0 2 3 2 Updated Aug 1, 2025
  • workflow-execution-service-schemas Public

    The WES API is a standard way to run and manage portable workflows.

    ga4gh/workflow-execution-service-schemas’s past year of commit activity
    85 Apache-2.0 38 54 7 Updated Jul 31, 2025
  • tool-registry-service-schemas Public

    APIs for discovering genomics tools, their metadata and their containers

    ga4gh/tool-registry-service-schemas’s past year of commit activity
    Shell 31 Apache-2.0 18 26 (2 issues need help) 1 Updated Jul 30, 2025
  • vrs Public

    Extensible specification for representing and uniquely identifying biological sequence variation

    ga4gh/vrs’s past year of commit activity
    Jupyter Notebook 92 Apache-2.0 38 28 (2 issues need help) 0 Updated Jul 29, 2025
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