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@johnmay johnmay commented Aug 21, 2023

… reactions where we don't want to abbreviate across a bond which is broken/made. The semantics are a little hard to follow but essentially we either reject the sgroup out right, or tentatively accept it (may be fixable). As in the test case, to allow -Ac and NOT -OAc we reject out right and don't mark the atoms as visited.

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johnmay commented Aug 21, 2023

hold

@johnmay johnmay marked this pull request as draft August 21, 2023 16:26
@johnmay johnmay marked this pull request as ready for review August 22, 2023 09:53
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johnmay commented Aug 22, 2023

All good now

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egonw commented Aug 22, 2023

@johnmay, when a PR is ready for me to review, plz just GH to invite me as reviewer.

@johnmay johnmay requested a review from egonw August 22, 2023 10:44
… reactions where we don't want to abbreviate across a bond which is broken/made. The semantics are a little hard to follow but essentially we either reject the sgroup out right, or tentatively accept it (may be fixable). As in the test case, to allow -Ac and NOT -OAc we reject out right and don't mark the atoms as visited.
@johnmay johnmay force-pushed the abbreviation-splitting branch from be6f0df to 7cf54c6 Compare August 22, 2023 10:45
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Kudos, SonarCloud Quality Gate passed!    Quality Gate passed

Bug A 0 Bugs
Vulnerability A 0 Vulnerabilities
Security Hotspot A 0 Security Hotspots
Code Smell A 1 Code Smell

85.4% 85.4% Coverage
0.0% 0.0% Duplication

@egonw egonw merged commit dcd4067 into main Aug 24, 2023
@johnmay johnmay deleted the abbreviation-splitting branch October 20, 2024 14:24
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2 participants