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In this example, the pre-D3 SCF energy on the Total Energy : line is -306.98073026 Eh, which is what cclib finds. However, the DFT+D3 energy is on the FINAL SINGLE POINT ENERGY line and is -306.983847616167 Eh.
I appreciate that this is possibly 'intended' behaviour, since strictly speaking, the D3 correction is post-SCF. However, this is inconsistent with, for example, Gaussian, since Gaussian includes the dispersion component in print outs of the SCF energy.