Move to using GenomicsDB 1.5.0 #8358

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droazen merged 1 commit into master from genomicsdb_150

Jun 12, 2023

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nalinigans commented Jun 9, 2023 •

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Move to using GenomicsDB Release 1.5.0.
Highlights in the release relevant to gatk are

readthedocs for GenomicsDB design/usage/functionality - readthedocs GenomicsDB/GenomicsDB#265.
java 17 support GenomicsDB/GenomicsDB#284
Use unflattened genomic coordinates in error messages from GenomicsDB queries. GenomicsDB/GenomicsDB#271
Exclude spark from genomicsdb core jar Exclude spark from core jar GenomicsDB/GenomicsDB#281
General improved performance/logging.


          Move to using GenomicsDB 1.5.0

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droazen approved these changes

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droazen merged commit 01b30ea into master

droazen deleted the genomicsdb_150 branch

June 12, 2023 16:47

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