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Official code repository for GATK versions 1.0 through 3.7 (core engine). For GATK 4 code, see the https://github.com/broadinstitute/gatk repository

software.broadinstitute.org/gatk/

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.github		.github
doc_archive		doc_archive
licensing		licensing
public		public
settings/helpTemplates		settings/helpTemplates
.gitignore		.gitignore
README.md		README.md
ant-bridge.sh		ant-bridge.sh
intellij_example.tar.bz2		intellij_example.tar.bz2
pom.xml		pom.xml

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The Genome Analysis Toolkit

See http://www.broadinstitute.org/gatk/