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Bioconductor #61

@fruce-ki

Description

@fruce-ki

Look into submitting RATs to Bioconductor.

  • R CMD CHECK flags
  • R CMD BiocCheck
  • DESCRIPTION : update author fields.
  • DESCRIPTION : add biocViews field with at least 2 values (https://bioconductor.org/packages/release/BiocViews.html).
  • Consider if it is appropriate to accommodate SummarizedExperiment as an input option (https://bioconductor.org/packages/release/bioc/html/SummarizedExperiment.html).
  • NAMESPACE : Review the @imports across all source code, replace with @importFrom wherever possible.
  • NEWS : Create this file, to track changes (consult ?news) for format. Cannot be plaintext.
  • Revise vignettes : Bioconductor styling
  • Revise vignettes : Minimise/remove non executable chunks
  • Revise vignettes : add Introduction section.
  • Revise vignettes : add Installation
  • Revise vignettes : add sessionInfo()
  • Revise vignettes : re-style third-party package citations to match their citation().
  • Switch to BiocParallel
  • Break down multi-page chunks of code.

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feature requestSuggestions for extended functionality.on holdAction was initiated, but is presently paused

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