R version 3.4.1 (2017-06-30) Platform: x86_64-pc-linux-gnu (64-bit) Running under: Ubuntu 14.04.5 LTS Matrix products: default BLAS: /anaconda3/lib/R/lib/libRblas.so LAPACK: /anaconda3/lib/R/lib/libRlapack.so locale: [1] LC_CTYPE=en_DK.UTF-8 LC_NUMERIC=C LC_TIME=en_DK.UTF-8 LC_COLLATE=en_DK.UTF-8 LC_MONETARY=en_DK.UTF-8 LC_MESSAGES=en_DK.UTF-8 [7] LC_PAPER=en_DK.UTF-8 LC_NAME=C LC_ADDRESS=C LC_TELEPHONE=C LC_MEASUREMENT=en_DK.UTF-8 LC_IDENTIFICATION=C attached base packages: [1] stats4 parallel stats graphics grDevices utils datasets methods base other attached packages: [1] EnsDb.Hsapiens.v75_2.99.0 ensembldb_2.2.2 AnnotationFilter_1.2.0 GenomicFeatures_1.30.3 AnnotationDbi_1.40.0 Biobase_2.38.0 [7] GenomicRanges_1.30.1 GenomeInfoDb_1.14.0 IRanges_2.12.0 S4Vectors_0.16.0 BiocGenerics_0.24.0 stringr_1.3.0 [13] readr_1.1.1 reshape2_1.4.3 wasabi_0.2 ggplot2_2.2.1 rats_0.6.3 data.table_1.11.0 [19] matrixStats_0.53.1 nvimcom_0.9-58 loaded via a namespace (and not attached): [1] Rcpp_0.12.15 lattice_0.20-35 prettyunits_1.0.2 Rsamtools_1.30.0 Biostrings_2.46.0 [6] assertthat_0.2.0 digest_0.6.15 mime_0.5 R6_2.2.2 plyr_1.8.4 [11] RSQLite_2.1.0 BiocInstaller_1.28.0 httr_1.3.1 pillar_1.2.2 zlibbioc_1.24.0 [16] rlang_0.2.0 progress_1.1.2 curl_3.2 lazyeval_0.2.1 blob_1.1.1 [21] Matrix_1.2-14 RMySQL_0.10.14 BiocParallel_1.12.0 AnnotationHub_2.10.1 ProtGenerics_1.10.0 [26] RCurl_1.95-4.10 bit_1.1-12 biomaRt_2.34.2 munsell_0.4.3 shiny_1.0.5 [31] DelayedArray_0.4.1 compiler_3.4.1 httpuv_1.3.6 rtracklayer_1.38.3 pkgconfig_2.0.1 [36] htmltools_0.3.6 SummarizedExperiment_1.8.1 interactiveDisplayBase_1.16.0 tibble_1.4.2 GenomeInfoDbData_1.0.0 [41] XML_3.98-1.11 GenomicAlignments_1.14.2 bitops_1.0-6 grid_3.4.1 xtable_1.8-2 [46] gtable_0.2.0 DBI_1.0.0 magrittr_1.5 scales_0.5.0 stringi_1.1.7 [51] XVector_0.18.0 rjson_0.2.18 tools_3.4.1 bit64_0.9-7 hms_0.4.2 [56] yaml_2.1.17 colorspace_1.3-2 rhdf5_2.22.0 memoise_1.1.0