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compile cuda presets on jetson nano #735

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compile cuda presets on jetson nano#735
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@kwatters

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@kwatters
kwatters
opened on Jun 8, 2019

So, I'm still working through building various javacpp presets for the jetson nano. Now, I'm working on getting the cuda version of libdn4j build. That depends on javacpp-cuda ... so, I've made some progress, but am running into a compilation issue that I'm hoping someone else might recognize ...

I've updated the cppbuild.sh to include a branch for linux-arm64 ... On the Jetson Nano, cuda is pre-installed into /usr/local/cuda (version 10.0 ) and it would seem the header files for cuDNN are available in /usr/include ...

in the javacpp-presets/cuda directory, i'm building with the following command

mvn clean install -DskipTests -Dmaven.javadoc.skip=true -Djavacpp.platform=linux-arm64 -nsu -X -Djavacpp.platform.library.path=/usr/local/cuda -Djavacpp.includePath=/usr/local/cuda/include:/usr/include

It seems to progress, but I end up with the failure below:

[INFO] Changes detected - recompiling the module!
[DEBUG] Classpath:
[DEBUG]  /home/kwatters/usb/javacpp-presets/cuda/target/classes
[DEBUG]  /home/kwatters/.m2/repository/org/bytedeco/javacpp/1.5/javacpp-1.5.jar
[DEBUG] Source roots:
[DEBUG]  /home/kwatters/usb/javacpp-presets/cuda/src/main/java
[DEBUG]  /home/kwatters/usb/javacpp-presets/cuda/src/gen/java
[DEBUG]  /home/kwatters/usb/javacpp-presets/cuda/cppbuild/linux-arm64/java
[DEBUG]  /home/kwatters/usb/javacpp-presets/cuda/target/generated-sources/annotations
[DEBUG] Command line options:
[DEBUG] -d /home/kwatters/usb/javacpp-presets/cuda/target/classes -classpath /home/kwatters/usb/javacpp-presets/cuda/target/classes:/home/kwatters/.m2/repository/org/bytedeco/javacpp/1.5/javacpp-1.5.jar: -sourcepath /home/kwatters/usb/javacpp-presets/cuda/src/main/java:/home/kwatters/usb/javacpp-presets/cuda/src/gen/java:/home/kwatters/usb/javacpp-presets/cuda/target/generated-sources/annotations:/home/kwatters/usb/javacpp-presets/cuda/target/generated-sources/annotations: -s /home/kwatters/usb/javacpp-presets/cuda/target/generated-sources/annotations -g -nowarn -target 1.7 -source 1.7 -encoding UTF-8
[DEBUG] incrementalBuildHelper#beforeRebuildExecution
[INFO] Compiling 325 source files to /home/kwatters/usb/javacpp-presets/cuda/target/classes
[DEBUG] incrementalBuildHelper#afterRebuildExecution
[INFO] /home/kwatters/usb/javacpp-presets/cuda/src/gen/java/org/bytedeco/cuda/cudart/uint4.java: Some input files use unchecked or unsafe operations.
[INFO] /home/kwatters/usb/javacpp-presets/cuda/src/gen/java/org/bytedeco/cuda/cudart/uint4.java: Recompile with -Xlint:unchecked for details.
[INFO] -------------------------------------------------------------
[ERROR] COMPILATION ERROR :
[INFO] -------------------------------------------------------------
[ERROR] /home/kwatters/usb/javacpp-presets/cuda/src/gen/java/org/bytedeco/cuda/global/nppig.java:[1297,108] reference to NppiImageDescriptor is ambiguous
  both class org.bytedeco.cuda.nppc.NppiImageDescriptor in org.bytedeco.cuda.nppc and class org.bytedeco.cuda.nppig.NppiImageDescriptor in org.bytedeco.cuda.nppig match
[ERROR] /home/kwatters/usb/javacpp-presets/cuda/src/gen/java/org/bytedeco/cuda/global/nppig.java:[1297,139] reference to NppiImageDescriptor is ambiguous
  both class org.bytedeco.cuda.nppc.NppiImageDescriptor in org.bytedeco.cuda.nppc and class org.bytedeco.cuda.nppig.NppiImageDescriptor in org.bytedeco.cuda.nppig match
[ERROR] /home/kwatters/usb/javacpp-presets/cuda/src/gen/java/org/bytedeco/cuda/global/nppig.java:[1312,108] reference to NppiImageDescriptor is ambiguous
  both class org.bytedeco.cuda.nppc.NppiImageDescriptor in org.bytedeco.cuda.nppc and class org.bytedeco.cuda.nppig.NppiImageDescriptor in org.bytedeco.cuda.nppig match
[ERROR] /home/kwatters/usb/javacpp-presets/cuda/src/gen/java/org/bytedeco/cuda/global/nppig.java:[1312,139] reference to NppiImageDescriptor is ambiguous
  both class org.bytedeco.cuda.nppc.NppiImageDescriptor in org.bytedeco.cuda.nppc and class org.bytedeco.cuda.nppig.NppiImageDescriptor in org.bytedeco.cuda.nppig match
[ERROR] /home/kwatters/usb/javacpp-presets/cuda/src/gen/java/org/bytedeco/cuda/global/nppig.java:[1327,108] reference to NppiImageDescriptor is ambiguous
  both class org.bytedeco.cuda.nppc.NppiImageDescriptor in org.bytedeco.cuda.nppc and class org.bytedeco.cuda.nppig.NppiImageDescriptor in org.bytedeco.cuda.nppig match
[ERROR] /home/kwatters/usb/javacpp-presets/cuda/src/gen/java/org/bytedeco/cuda/global/nppig.java:[1327,139] reference to NppiImageDescriptor is ambiguous
  both class org.bytedeco.cuda.nppc.NppiImageDescriptor in org.bytedeco.cuda.nppc and class org.bytedeco.cuda.nppig.NppiImageDescriptor in org.bytedeco.cuda.nppig match
[ERROR] /home/kwatters/usb/javacpp-presets/cuda/src/gen/java/org/bytedeco/cuda/global/nppig.java:[1342,109] reference to NppiImageDescriptor is ambiguous
  both class org.bytedeco.cuda.nppc.NppiImageDescriptor in org.bytedeco.cuda.nppc and class org.bytedeco.cuda.nppig.NppiImageDescriptor in org.bytedeco.cuda.nppig match
[ERROR] /home/kwatters/usb/javacpp-presets/cuda/src/gen/java/org/bytedeco/cuda/global/nppig.java:[1342,140] reference to NppiImageDescriptor is ambiguous
  both class org.bytedeco.cuda.nppc.NppiImageDescriptor in org.bytedeco.cuda.nppc and class org.bytedeco.cuda.nppig.NppiImageDescriptor in org.bytedeco.cuda.nppig match
[ERROR] /home/kwatters/usb/javacpp-presets/cuda/src/gen/java/org/bytedeco/cuda/global/nppig.java:[1357,109] reference to NppiImageDescriptor is ambiguous
  both class org.bytedeco.cuda.nppc.NppiImageDescriptor in org.bytedeco.cuda.nppc and class org.bytedeco.cuda.nppig.NppiImageDescriptor in org.bytedeco.cuda.nppig match
[ERROR] /home/kwatters/usb/javacpp-presets/cuda/src/gen/java/org/bytedeco/cuda/global/nppig.java:[1357,140] reference to NppiImageDescriptor is ambiguous
  both class org.bytedeco.cuda.nppc.NppiImageDescriptor in org.bytedeco.cuda.nppc and class org.bytedeco.cuda.nppig.NppiImageDescriptor in org.bytedeco.cuda.nppig match
[ERROR] /home/kwatters/usb/javacpp-presets/cuda/src/gen/java/org/bytedeco/cuda/global/nppig.java:[1372,109] reference to NppiImageDescriptor is ambiguous
  both class org.bytedeco.cuda.nppc.NppiImageDescriptor in org.bytedeco.cuda.nppc and class org.bytedeco.cuda.nppig.NppiImageDescriptor in org.bytedeco.cuda.nppig match
[ERROR] /home/kwatters/usb/javacpp-presets/cuda/src/gen/java/org/bytedeco/cuda/global/nppig.java:[1372,140] reference to NppiImageDescriptor is ambiguous
  both class org.bytedeco.cuda.nppc.NppiImageDescriptor in org.bytedeco.cuda.nppc and class org.bytedeco.cuda.nppig.NppiImageDescriptor in org.bytedeco.cuda.nppig match
[ERROR] /home/kwatters/usb/javacpp-presets/cuda/src/gen/java/org/bytedeco/cuda/global/nppig.java:[1387,109] reference to NppiImageDescriptor is ambiguous
  both class org.bytedeco.cuda.nppc.NppiImageDescriptor in org.bytedeco.cuda.nppc and class org.bytedeco.cuda.nppig.NppiImageDescriptor in org.bytedeco.cuda.nppig match
[ERROR] /home/kwatters/usb/javacpp-presets/cuda/src/gen/java/org/bytedeco/cuda/global/nppig.java:[1387,140] reference to NppiImageDescriptor is ambiguous
  both class org.bytedeco.cuda.nppc.NppiImageDescriptor in org.bytedeco.cuda.nppc and class org.bytedeco.cuda.nppig.NppiImageDescriptor in org.bytedeco.cuda.nppig match
[ERROR] /home/kwatters/usb/javacpp-presets/cuda/src/gen/java/org/bytedeco/cuda/global/nppig.java:[1402,110] reference to NppiImageDescriptor is ambiguous
  both class org.bytedeco.cuda.nppc.NppiImageDescriptor in org.bytedeco.cuda.nppc and class org.bytedeco.cuda.nppig.NppiImageDescriptor in org.bytedeco.cuda.nppig match
[ERROR] /home/kwatters/usb/javacpp-presets/cuda/src/gen/java/org/bytedeco/cuda/global/nppig.java:[1402,141] reference to NppiImageDescriptor is ambiguous
  both class org.bytedeco.cuda.nppc.NppiImageDescriptor in org.bytedeco.cuda.nppc and class org.bytedeco.cuda.nppig.NppiImageDescriptor in org.bytedeco.cuda.nppig match
[INFO] 16 errors
[INFO] -------------------------------------------------------------
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time:  06:03 min
[INFO] Finished at: 2019-06-07T22:37:19-04:00
[INFO] ------------------------------------------------------------------------
[ERROR] Failed to execute goal org.apache.maven.plugins:maven-compiler-plugin:3.8.0:compile (default-compile) on project cuda: Compilation failure: Compilation failure:
[ERROR] /home/kwatters/usb/javacpp-presets/cuda/src/gen/java/org/bytedeco/cuda/global/nppig.java:[1297,108] reference to NppiImageDescriptor is ambiguous
[ERROR]   both class org.bytedeco.cuda.nppc.NppiImageDescriptor in org.bytedeco.cuda.nppc and class org.bytedeco.cuda.nppig.NppiImageDescriptor in org.bytedeco.cuda.nppig match
[ERROR] /home/kwatters/usb/javacpp-presets/cuda/src/gen/java/org/bytedeco/cuda/global/nppig.java:[1297,139] reference to NppiImageDescriptor is ambiguous
[ERROR]   both class org.bytedeco.cuda.nppc.NppiImageDescriptor in org.bytedeco.cuda.nppc and class org.bytedeco.cuda.nppig.NppiImageDescriptor in org.bytedeco.cuda.nppig match
[ERROR] /home/kwatters/usb/javacpp-presets/cuda/src/gen/java/org/bytedeco/cuda/global/nppig.java:[1312,108] reference to NppiImageDescriptor is ambiguous
[ERROR]   both class org.bytedeco.cuda.nppc.NppiImageDescriptor in org.bytedeco.cuda.nppc and class org.bytedeco.cuda.nppig.NppiImageDescriptor in org.bytedeco.cuda.nppig match
[ERROR] /home/kwatters/usb/javacpp-presets/cuda/src/gen/java/org/bytedeco/cuda/global/nppig.java:[1312,139] reference to NppiImageDescriptor is ambiguous
[ERROR]   both class org.bytedeco.cuda.nppc.NppiImageDescriptor in org.bytedeco.cuda.nppc and class org.bytedeco.cuda.nppig.NppiImageDescriptor in org.bytedeco.cuda.nppig match
[ERROR] /home/kwatters/usb/javacpp-presets/cuda/src/gen/java/org/bytedeco/cuda/global/nppig.java:[1327,108] reference to NppiImageDescriptor is ambiguous
[ERROR]   both class org.bytedeco.cuda.nppc.NppiImageDescriptor in org.bytedeco.cuda.nppc and class org.bytedeco.cuda.nppig.NppiImageDescriptor in org.bytedeco.cuda.nppig match
[ERROR] /home/kwatters/usb/javacpp-presets/cuda/src/gen/java/org/bytedeco/cuda/global/nppig.java:[1327,139] reference to NppiImageDescriptor is ambiguous
[ERROR]   both class org.bytedeco.cuda.nppc.NppiImageDescriptor in org.bytedeco.cuda.nppc and class org.bytedeco.cuda.nppig.NppiImageDescriptor in org.bytedeco.cuda.nppig match
[ERROR] /home/kwatters/usb/javacpp-presets/cuda/src/gen/java/org/bytedeco/cuda/global/nppig.java:[1342,109] reference to NppiImageDescriptor is ambiguous
[ERROR]   both class org.bytedeco.cuda.nppc.NppiImageDescriptor in org.bytedeco.cuda.nppc and class org.bytedeco.cuda.nppig.NppiImageDescriptor in org.bytedeco.cuda.nppig match
[ERROR] /home/kwatters/usb/javacpp-presets/cuda/src/gen/java/org/bytedeco/cuda/global/nppig.java:[1342,140] reference to NppiImageDescriptor is ambiguous
[ERROR]   both class org.bytedeco.cuda.nppc.NppiImageDescriptor in org.bytedeco.cuda.nppc and class org.bytedeco.cuda.nppig.NppiImageDescriptor in org.bytedeco.cuda.nppig match
[ERROR] /home/kwatters/usb/javacpp-presets/cuda/src/gen/java/org/bytedeco/cuda/global/nppig.java:[1357,109] reference to NppiImageDescriptor is ambiguous
[ERROR]   both class org.bytedeco.cuda.nppc.NppiImageDescriptor in org.bytedeco.cuda.nppc and class org.bytedeco.cuda.nppig.NppiImageDescriptor in org.bytedeco.cuda.nppig match
[ERROR] /home/kwatters/usb/javacpp-presets/cuda/src/gen/java/org/bytedeco/cuda/global/nppig.java:[1357,140] reference to NppiImageDescriptor is ambiguous
[ERROR]   both class org.bytedeco.cuda.nppc.NppiImageDescriptor in org.bytedeco.cuda.nppc and class org.bytedeco.cuda.nppig.NppiImageDescriptor in org.bytedeco.cuda.nppig match
[ERROR] /home/kwatters/usb/javacpp-presets/cuda/src/gen/java/org/bytedeco/cuda/global/nppig.java:[1372,109] reference to NppiImageDescriptor is ambiguous
[ERROR]   both class org.bytedeco.cuda.nppc.NppiImageDescriptor in org.bytedeco.cuda.nppc and class org.bytedeco.cuda.nppig.NppiImageDescriptor in org.bytedeco.cuda.nppig match
[ERROR] /home/kwatters/usb/javacpp-presets/cuda/src/gen/java/org/bytedeco/cuda/global/nppig.java:[1372,140] reference to NppiImageDescriptor is ambiguous
[ERROR]   both class org.bytedeco.cuda.nppc.NppiImageDescriptor in org.bytedeco.cuda.nppc and class org.bytedeco.cuda.nppig.NppiImageDescriptor in org.bytedeco.cuda.nppig match
[ERROR] /home/kwatters/usb/javacpp-presets/cuda/src/gen/java/org/bytedeco/cuda/global/nppig.java:[1387,109] reference to NppiImageDescriptor is ambiguous
[ERROR]   both class org.bytedeco.cuda.nppc.NppiImageDescriptor in org.bytedeco.cuda.nppc and class org.bytedeco.cuda.nppig.NppiImageDescriptor in org.bytedeco.cuda.nppig match
[ERROR] /home/kwatters/usb/javacpp-presets/cuda/src/gen/java/org/bytedeco/cuda/global/nppig.java:[1387,140] reference to NppiImageDescriptor is ambiguous
[ERROR]   both class org.bytedeco.cuda.nppc.NppiImageDescriptor in org.bytedeco.cuda.nppc and class org.bytedeco.cuda.nppig.NppiImageDescriptor in org.bytedeco.cuda.nppig match
[ERROR] /home/kwatters/usb/javacpp-presets/cuda/src/gen/java/org/bytedeco/cuda/global/nppig.java:[1402,110] reference to NppiImageDescriptor is ambiguous
[ERROR]   both class org.bytedeco.cuda.nppc.NppiImageDescriptor in org.bytedeco.cuda.nppc and class org.bytedeco.cuda.nppig.NppiImageDescriptor in org.bytedeco.cuda.nppig match
[ERROR] /home/kwatters/usb/javacpp-presets/cuda/src/gen/java/org/bytedeco/cuda/global/nppig.java:[1402,141] reference to NppiImageDescriptor is ambiguous
[ERROR]   both class org.bytedeco.cuda.nppc.NppiImageDescriptor in org.bytedeco.cuda.nppc and class org.bytedeco.cuda.nppig.NppiImageDescriptor in org.bytedeco.cuda.nppig match
[ERROR] -> [Help 1]
org.apache.maven.lifecycle.LifecycleExecutionException: Failed to execute goal org.apache.maven.plugins:maven-compiler-plugin:3.8.0:compile (default-compile) on project cuda: Compilation failure
    at org.apache.maven.lifecycle.internal.MojoExecutor.execute (MojoExecutor.java:215)
    at org.apache.maven.lifecycle.internal.MojoExecutor.execute (MojoExecutor.java:156)
    at org.apache.maven.lifecycle.internal.MojoExecutor.execute (MojoExecutor.java:148)
    at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject (LifecycleModuleBuilder.java:117)
    at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject (LifecycleModuleBuilder.java:81)
    at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build (SingleThreadedBuilder.java:56)
    at org.apache.maven.lifecycle.internal.LifecycleStarter.execute (LifecycleStarter.java:128)
    at org.apache.maven.DefaultMaven.doExecute (DefaultMaven.java:305)
    at org.apache.maven.DefaultMaven.doExecute (DefaultMaven.java:192)
    at org.apache.maven.DefaultMaven.execute (DefaultMaven.java:105)
    at org.apache.maven.cli.MavenCli.execute (MavenCli.java:956)
    at org.apache.maven.cli.MavenCli.doMain (MavenCli.java:288)
    at org.apache.maven.cli.MavenCli.main (MavenCli.java:192)
    at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0 (Native Method)
    at jdk.internal.reflect.NativeMethodAccessorImpl.invoke (NativeMethodAccessorImpl.java:62)
    at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke (DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke (Method.java:566)
    at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced (Launcher.java:289)
    at org.codehaus.plexus.classworlds.launcher.Launcher.launch (Launcher.java:229)
    at org.codehaus.plexus.classworlds.launcher.Launcher.mainWithExitCode (Launcher.java:415)
    at org.codehaus.plexus.classworlds.launcher.Launcher.main (Launcher.java:356)
Caused by: org.apache.maven.plugin.compiler.CompilationFailureException: Compilation failure
    at org.apache.maven.plugin.compiler.AbstractCompilerMojo.execute (AbstractCompilerMojo.java:1215)
    at org.apache.maven.plugin.compiler.CompilerMojo.execute (CompilerMojo.java:188)
    at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo (DefaultBuildPluginManager.java:137)
    at org.apache.maven.lifecycle.internal.MojoExecutor.execute (MojoExecutor.java:210)
    at org.apache.maven.lifecycle.internal.MojoExecutor.execute (MojoExecutor.java:156)
    at org.apache.maven.lifecycle.internal.MojoExecutor.execute (MojoExecutor.java:148)
    at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject (LifecycleModuleBuilder.java:117)
    at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject (LifecycleModuleBuilder.java:81)
    at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build (SingleThreadedBuilder.java:56)
    at org.apache.maven.lifecycle.internal.LifecycleStarter.execute (LifecycleStarter.java:128)
    at org.apache.maven.DefaultMaven.doExecute (DefaultMaven.java:305)
    at org.apache.maven.DefaultMaven.doExecute (DefaultMaven.java:192)
    at org.apache.maven.DefaultMaven.execute (DefaultMaven.java:105)
    at org.apache.maven.cli.MavenCli.execute (MavenCli.java:956)
    at org.apache.maven.cli.MavenCli.doMain (MavenCli.java:288)
    at org.apache.maven.cli.MavenCli.main (MavenCli.java:192)
    at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0 (Native Method)
    at jdk.internal.reflect.NativeMethodAccessorImpl.invoke (NativeMethodAccessorImpl.java:62)
    at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke (DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke (Method.java:566)
    at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced (Launcher.java:289)
    at org.codehaus.plexus.classworlds.launcher.Launcher.launch (Launcher.java:229)
    at org.codehaus.plexus.classworlds.launcher.Launcher.mainWithExitCode (Launcher.java:415)
    at org.codehaus.plexus.classworlds.launcher.Launcher.main (Launcher.java:356)
[ERROR]
[ERROR]
[ERROR] For more information about the errors and possible solutions, please read the following articles:
[ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoFailureException

Any help is appreciated. I am building this on the 1.5 tagged release. I'm happy to provide a PR with my changes once I get it working.

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