Pinned Loading

1. PPIRef PPIRef Public

   Dataset and package for working with protein-protein interactions in 3D

   Jupyter Notebook 95 9

2. PPIformer PPIformer Public

   Learning to design protein-protein interactions with enhanced generalization (ICLR 2024)

   Jupyter Notebook 46 5

3. mutils mutils Public

   Mutation utilities for protein design

   Jupyter Notebook 5 1

4. ProteinTTT ProteinTTT Public

   Training on test proteins improves fitness, structure, and function prediction

   Python 12 2

5. pluskal-lab/MassSpecGym pluskal-lab/MassSpecGym Public

   MassSpecGym: A benchmark for the discovery and identification of molecules (NeurIPS 2024 Spotlight)

   Jupyter Notebook 88 10

6. pluskal-lab/DreaMS pluskal-lab/DreaMS Public

   Self-supervised learning of molecular representations from millions of tandem mass spectra using DreaMS (Nat Biotechnology)

   Jupyter Notebook 98 23