Adustments to Mass Plotting Workflow #1067
Merged
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What is the purpose of this PR?
Addresses a few incorrect and missing features in the mass plotting notebook.
dpi
andfig_size
to bothcohort_cluster_plot
andcolor_segmentation_by_stat
cohort_cluster_plot
"none"
tocolor_segmentation_by_stat
to prevent interpolation of the cell bordersmatplotlib
How did you implement your changes
Added those small changes. The reason the colors were not mapping to the cluster appropriately was because the NumPy Array conversion to the colormaps didn't take into account that the colors need to be sorted w.r.t their associated cluster id.
Remaining issues
N/A.