Fix error from zero fibers in an image #1011
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What is the purpose of this PR?
When an image has no fibers in it,
calculate_fiber_alignment()errors out withinsegment_fibers()while processing the image.This is an issue with
pd.concat()attempting to be called on an empty list.How did you implement your changes
Easy to fix by moving the
calculate_fiber_alignment()call into the wrapper functionrun_fiber_segmentation()for all processing rather than individual image call. This was where the function was intended to be anywaysRemaining issues
N/A