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Hey Alex,
I've been trying to run a normal 10x run, but it seems to giving me this error:
Jun 23 15:34:33 ..... started STAR run
Jun 23 15:34:33 ..... loading genome
Jun 23 15:35:04 ..... started mapping
Jun 23 16:16:43 ..... finished mapping
Jun 23 16:16:49 ..... started Solo counting
malloc(): invalid size (unsorted)
Aborted (core dumped)
It seems to always happen at the same place, I've tried this with the BAM file (from the same run as the fastq) as input.
In the Solo.out folder I have the Barcode.stats file, but the GeneFull dir is empty.
Log (2).txt
Log.progress.txt