error while parsing GFA path record #1342
Description
Description of bug
binspreader threw an error while parsing assembly_graph_with_scaffolds.gfa. It looks like there are semicolons where the program was expecting tabs. I did not modify the assembly graph in any way after the assembly.
spades.log
There was no spades.log file I can find from this run. I am attaching the log output from the hpc job.
params.txt
There was no params.txt file for this run.
SPAdes version
4.0.0
Operating System
Linux Rocky 8.9
Python Version
3.11.4
Method of SPAdes installation
binaries
No errors reported in spades.log
- Yes