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NCBI - National Center for Biotechnology Information/NLM/NIH

2.2k followers
http://www.ncbi.nlm.nih.gov
github-tools@ncbi.nlm.nih.gov

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gprobe gprobe Public

client app for the gRPC health-checking protocol

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Showing 10 of 162 repositories

ncbi-cxx-toolkit-public Public
NCBI C++ Toolkit package sources

ncbi/ncbi-cxx-toolkit-public’s past year of commit activity

C++ 76 35 0 0 Updated Aug 17, 2025
ncbi-vdb Public
ncbi-vdb

ncbi/ncbi-vdb’s past year of commit activity

C 92 42 10 2 Updated Aug 16, 2025
sra-tools Public
SRA Tools

ncbi/sra-tools’s past year of commit activity

C 1,248 266 22 7 Updated Aug 15, 2025
datasets Public
NCBI Datasets is a new resource that lets you easily gather data from across NCBI databases.

ncbi/datasets’s past year of commit activity

Jupyter Notebook 445 52 19 2 Updated Aug 14, 2025
vadr Public
Viral Annotation DefineR: classification and annotation of viral sequences based on RefSeq annotation

ncbi/vadr’s past year of commit activity

Perl 110 27 7 0 Updated Aug 14, 2025
workshop-sra-hands-on Public
SRA Outreach to the NIH Research Festival and ASHG 2025

ncbi/workshop-sra-hands-on’s past year of commit activity

0 0 0 0 Updated Aug 13, 2025
tree-tool Public
Incremental building of phylogenetic distance trees

ncbi/tree-tool’s past year of commit activity

HTML 25 10 0 1 Updated Aug 13, 2025
amr Public
AMRFinderPlus - Identify AMR genes and point mutations, and virulence and stress resistance genes in assembled bacterial nucleotide and protein sequence.

ncbi/amr’s past year of commit activity

C++ 320 46 10 0 Updated Aug 11, 2025
cwl-ngs-workflows-cbb Public
A set of CWL tools and workflows used by NCBI Computational Biology Branch for NGS data analysis

ncbi/cwl-ngs-workflows-cbb’s past year of commit activity

Common Workflow Language 24 10 0 0 Updated Aug 7, 2025
ncbi-cxx-toolkit-conan Public
NCBI C++ Toolkit package recipe

ncbi/ncbi-cxx-toolkit-conan’s past year of commit activity

Python 10 10 0 0 Updated Aug 5, 2025

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