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base repository: mbhall88/rasusa
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base: 2.1.0
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head repository: mbhall88/rasusa
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compare: 2.1.1
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- 9 commits
- 11 files changed
- 3 contributors
Commits on Aug 30, 2024
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Commits on Sep 12, 2024
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Commits on Nov 29, 2024
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Commits on Jul 10, 2025
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Commits on Jul 25, 2025
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fix: improper shuffling of records with same position in aln subcommand
The random_sort function was only introducing randomness at the comparison level rather than properly shuffling groups of records with the same position. This meant that records with identical positions would maintain their original relative order instead of being randomly distributed within their group. Changes: - Replace random_sort/random_compare with shuffle_records_by_position - Group records by position before shuffling within each group - Add comprehensive tests including edge cases and regression tests - Fix clippy format string warnings in alignment.rs, fastx.rs, and subsampler.rs - Add demonstration test that reproduces the original bug The new implementation ensures that records with the same genomic position are properly randomized while maintaining correct positional ordering between different positions, fixing the reproducible bias in subsampling results. Fixes #76
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