Not running final consensus since no rukki paths provided! #162
Description
Just installed the latest v1.4 using conda (with no installation issue), and run verkko with --hic1/--hic2 option, but encountered error like below:
5-untip/nodecov_hifi_fix.csv
Exiting because a job execution failed. Look above for error message
Complete log: .snakemake/log/2023-06-30T082326.215214.snakemake.log
ERROR!
Not running final consensus since no rukki paths provided!
I added rukki (~/miniconda3/lib/verkko/bin/rukki) to PATH and re-run, but still failed with same error.
>verkko --version
bioconda verkko bioconda 1.4
>rukki
extraction of paths from assembly graphs
Usage: rukki <COMMAND>
Any suggestion?
Thanks