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I am creating a sketch database from ~1500 genomes. These are all in individual FASTA files. When using multiple processors I often encounter the error: ERROR: Did not find fasta records in "GCF_000755225.1_genomic.fna"
I have examined this file and it is a valid FASTA file with a single sequence. Note, that using different numbers of processors results in a different input file causing the error. Moreover, the sketch database builds properly if I use a single processor.
I am running Mash as follows: mash sketch -p 23 -o ../gtdb *.fna