Hi

I note no mention of paired-end data in the docs; sketching with multiple files creates a multi-file sketch, but if I want a single sketch per paired-end sample, how is this done?

I assume I should be able to use sub-shells and/or zcat and pipe to stdin; however when i did this on our cluster I got core dumps (admittedly I seem to be having some problems with zcat on our cluster....)

At the very least it may be a good idea to update your docs to reflect how to sketch paired-end read data

Cheers
Mick