Skip to content

Crash on running example command #15

@hexylena

Description

@hexylena

Howdy! Mash looks like a lot of fun and I'd like to try it out, but after getting it built, I see a crash when running the example command:

./mash dist genome1.fna genome2.fna

Here's the crash message:

hxr@leda:~/work/Mash$ ./mash dist genome1.fna genome2.fna
Sketching genome1.fna (provide sketch file made with "mash sketch" to skip)...*** stack smashing detected ***: ./mash terminated
Aborted (core dumped)

And opening the core dump up in gdb:

[New LWP 13107]
[Thread debugging using libthread_db enabled]
Using host libthread_db library "/lib/x86_64-linux-gnu/libthread_db.so.1".
Core was generated by `./mash dist genome1.fna genome2.fna'.
Program terminated with signal SIGABRT, Aborted.
#0  0x00007f1065a46267 in __GI_raise (sig=sig@entry=6) at ../sysdeps/unix/sysv/linux/raise.c:55
55      ../sysdeps/unix/sysv/linux/raise.c: No such file or directory.

can post core dump/etc if needed :)

Other stuff:

$ uname -a
Linux leda 3.19.0-30-generic #34-Ubuntu SMP Fri Oct 2 22:08:41 UTC 2015 x86_64 x86_64 x86_64 GNU/Linux
$ gcc --version
gcc (Ubuntu 4.9.2-10ubuntu13) 4.9.2

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    No type

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions