Merge pull request #23 from mtisza1/update7

Update7: add `--circ-files` and fix zenodo DL. To v3.4.1

Merge pull request #21 from mtisza1/update6

fixing pyhmmer syntax, re.sub syntax

Merge pull request #17 from mtisza1/update5

to v3.3.2, Update5

Merge pull request #7 from mtisza1/update4

Update4, to v3.3.1

Merge pull request #5 from mtisza1/update3

Update3 (v3.3.0 updates)

Merge pull request #3 from mtisza1/update2

Update2: to v3.2.1

Merge pull request #1 from mtisza1/update1

Update1