Plotting custom coastline fails in some projections since Matplolib 3.8 #2260
Description
Description
Plotting custom coastline fails in some projections since Matplolib 3.8
The coastline is a series of longitude/latitude values. A few values are set to np.nan to interrupt the line between continental masses.
The code will produce a first figure, which is close to what we want. But with an obvious problem.
The second figure fails in the present environment, but was perfectly fine with older version of Matplotlib (and other packages, but I haven't a log of that)
Thanks,
Olivier
Code to reproduce
import xarray as xr
import matplotlib.pyplot as plt
import cartopy.crs as ccrs
f_c = 'https://thredds-su.ipsl.fr/thredds/dodsC/tgcc_thredds/work/p86mart/GRAF/DATA/eorca1.4.2_coastline.nc'
d_c = xr.open_dataset (f_c)
# Read line data
## lon_coast, lat_coast contain nan where the line must be interrupted
lon_coast = d_c['lon_coast'] ; lat_coast = d_c['lat_coast']
# Describe the model projection in the file
ProjIn = ccrs.PlateCarree (central_longitude=0)
# Projection for plots
ProjPlot = ccrs.Robinson (central_longitude=0) # Plotted projection
# Creates the figure, with a projection
fix, ax = plt.subplots ( 1, 2, subplot_kw={'projection':ProjPlot} )
# Plot model coastline
## This plot works, but is not what we want !
ax[0].plot (lon_coast.fillna(0), lat_coast.fillna(0), linewidth=2, color='red' , transform=ProjIn)
# This plot fails. It was OK with Matplotlib 3.7
np.seterr (all='ignore') # Does not help
ax[1].plot (lon_coast, lat_coast, linewidth=1, color='blue', transform=ProjIn)
Traceback
--------------------------------------------------------------------------
GEOSException Traceback (most recent call last)
Cell In[17], line 27
25 # This plot fails. It was OK with Matplotlib 3.7
26 np.seterr (all='ignore') # Does not help
---> 27 ax[1].plot (lon_coast, lat_coast, linewidth=1, color='blue', transform=ProjIn)
File ~/mambaforge/envs/FULL/lib/python3.10/site-packages/matplotlib/axes/_axes.py:1723, in Axes.plot(self, scalex, scaley, data, *args, **kwargs)
1721 lines = [*self._get_lines(self, *args, data=data, **kwargs)]
1722 for line in lines:
-> 1723 self.add_line(line)
1724 if scalex:
1725 self._request_autoscale_view("x")
File ~/mambaforge/envs/FULL/lib/python3.10/site-packages/matplotlib/axes/_base.py:2309, in _AxesBase.add_line(self, line)
2306 if line.get_clip_path() is None:
2307 line.set_clip_path(self.patch)
-> 2309 self._update_line_limits(line)
2310 if not line.get_label():
2311 line.set_label(f'_child{len(self._children)}')
File ~/mambaforge/envs/FULL/lib/python3.10/site-packages/matplotlib/axes/_base.py:2348, in _AxesBase._update_line_limits(self, line)
2346 if self.transData.is_affine:
2347 line_trans_path = line._get_transformed_path()
-> 2348 na_path, _ = line_trans_path.get_transformed_path_and_affine()
2349 data_path = trf_to_data.transform_path_affine(na_path)
2350 else:
File ~/mambaforge/envs/FULL/lib/python3.10/site-packages/matplotlib/transforms.py:2776, in TransformedPath.get_transformed_path_and_affine(self)
2770 def get_transformed_path_and_affine(self):
2771 """
2772 Return a copy of the child path, with the non-affine part of
2773 the transform already applied, along with the affine part of
2774 the path necessary to complete the transformation.
2775 """
-> 2776 self._revalidate()
2777 return self._transformed_path, self.get_affine()
File ~/mambaforge/envs/FULL/lib/python3.10/site-packages/matplotlib/transforms.py:2752, in TransformedPath._revalidate(self)
2746 def _revalidate(self):
2747 # only recompute if the invalidation includes the non_affine part of
2748 # the transform
2749 if (self._invalid == self._INVALID_FULL
2750 or self._transformed_path is None):
2751 self._transformed_path = \
-> 2752 self._transform.transform_path_non_affine(self._path)
2753 self._transformed_points = \
2754 Path._fast_from_codes_and_verts(
2755 self._transform.transform_non_affine(self._path.vertices),
2756 None, self._path)
2757 self._invalid = 0
File ~/mambaforge/envs/FULL/lib/python3.10/site-packages/matplotlib/transforms.py:2426, in CompositeGenericTransform.transform_path_non_affine(self, path)
2424 return path
2425 elif not self._a.is_affine and self._b.is_affine:
-> 2426 return self._a.transform_path_non_affine(path)
2427 else:
2428 return self._b.transform_path_non_affine(
2429 self._a.transform_path(path))
File ~/mambaforge/envs/FULL/lib/python3.10/site-packages/cartopy/mpl/geoaxes.py:186, in InterProjectionTransform.transform_path_non_affine(self, src_path)
182 geoms = cpatch.path_to_geos(src_path,
183 getattr(self, 'force_path_ccw', False))
185 for geom in geoms:
--> 186 proj_geom = self.target_projection.project_geometry(
187 geom, self.source_projection)
188 transformed_geoms.append(proj_geom)
190 if not transformed_geoms:
File ~/mambaforge/envs/FULL/lib/python3.10/site-packages/cartopy/crs.py:817, in Projection.project_geometry(self, geometry, src_crs)
815 if not method_name:
816 raise ValueError(f'Unsupported geometry type {geom_type!r}')
--> 817 return getattr(self, method_name)(geometry, src_crs)
File ~/mambaforge/envs/FULL/lib/python3.10/site-packages/cartopy/crs.py:922, in Projection._project_multiline(self, geometry, src_crs)
920 geoms = []
921 for geom in geometry.geoms:
--> 922 r = self._project_line_string(geom, src_crs)
923 if r:
924 geoms.extend(r.geoms)
File ~/mambaforge/envs/FULL/lib/python3.10/site-packages/cartopy/crs.py:823, in Projection._project_line_string(self, geometry, src_crs)
822 def _project_line_string(self, geometry, src_crs):
--> 823 return cartopy.trace.project_linear(geometry, src_crs, self)
File lib/cartopy/trace.pyx:585, in cartopy.trace.project_linear()
File ~/mambaforge/envs/FULL/lib/python3.10/site-packages/shapely/prepared.py:45, in PreparedGeometry.covers(self, other)
43 def covers(self, other):
44 """Returns True if the geometry covers the other, else False"""
---> 45 return self.context.covers(other)
File ~/mambaforge/envs/FULL/lib/python3.10/site-packages/shapely/geometry/base.py:650, in BaseGeometry.covers(self, other)
648 def covers(self, other):
649 """Returns True if the geometry covers the other, else False"""
--> 650 return _maybe_unpack(shapely.covers(self, other))
File ~/mambaforge/envs/FULL/lib/python3.10/site-packages/shapely/decorators.py:77, in multithreading_enabled.<locals>.wrapped(*args, **kwargs)
75 for arr in array_args:
76 arr.flags.writeable = False
---> 77 return func(*args, **kwargs)
78 finally:
79 for arr, old_flag in zip(array_args, old_flags):
File ~/mambaforge/envs/FULL/lib/python3.10/site-packages/shapely/predicates.py:688, in covers(a, b, **kwargs)
642 @multithreading_enabled
643 def covers(a, b, **kwargs):
644 """Returns True if no point in geometry B is outside geometry A.
645
646 Parameters
(...)
686 False
687 """
--> 688 return lib.covers(a, b, **kwargs)
GEOSException: IllegalArgumentException: CGAlgorithmsDD::orientationIndex encountered NaN/Inf numbers
Full environment definition
Operating system
Mac OS X 13.5.2
Cartopy versions (and others)
Version python : 3.10.12 | packaged by conda-forge | (main, Jun 23 2023, 22:39:40) [Clang 15.0.7 ]
Version numpy : 1.23.5
Version xarray : 2023.9.0
Version Matplotlib : 3.8.0
Version Cartopy : 0.22.0
conda list
# packages in environment at /Users/marti/mambaforge/envs/FULL:
#
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tapi 1100.0.11 h9ce4665_0 conda-forge
tblib 2.0.0 pyhd8ed1ab_0 conda-forge
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xlrd 2.0.1 pyhd8ed1ab_3 conda-forge
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xorg-xproto 7.0.31 h35c211d_1007 conda-forge
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xyzservices 2023.7.0 pyhd8ed1ab_0 conda-forge
xz 5.2.6 h775f41a_0 conda-forge
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zfp 1.0.0 hf3d7188_4 conda-forge
zict 3.0.0 pyhd8ed1ab_0 conda-forge
zipp 3.17.0 pyhd8ed1ab_0 conda-forge
zlib 1.2.13 h8a1eda9_5 conda-forge
zlib-ng 2.0.7 hb7f2c08_0 conda-forge
zstd 1.5.5 h829000d_0 conda-forge