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- EX-TERR Public
An R package for polygenic risk score (PRS) generation that applies multivariate adaptive regression splines (MARS) to integrate genetic information from multiple related traits. The pipeline uses PCA-based variant transformations and a unique genotype-level cross-validation approach, eliminating the need for participant-level train/test split.
GMELab/EX-TERR’s past year of commit activity - lmutils Public
Utilities for linear regression-based statistical computation, particularly in the same vein as methods like MonsterLM and RARity
GMELab/lmutils’s past year of commit activity - lmutils.r Public
Utilities for linear regression-based statistical computation, particularly in the same vein as methods like MonsterLM and RARity
GMELab/lmutils.r’s past year of commit activity - docker Public
GMELab/docker’s past year of commit activity - col-combiner Public
GMELab/col-combiner’s past year of commit activity - RovHer Public
A heritability-optimized scoring method using multivariate adaptive regression splines that incorporates 75 variant- and gene-level features. RovHer leverages exome-wide association statistics to train models estimating the probability of RV functional impact.
GMELab/RovHer’s past year of commit activity - StratMRAlgo Public
An R-based software package which automates a stratified Mendelian randomization (MR) algorithm designed to identify effect modifiers of causal relationships
GMELab/StratMRAlgo’s past year of commit activity - RARity Public
A method to estimate rare variant heritability. Its versatility lies in the ability to estimate both gene-level and exome-wide heritability, in a fast, accurate, and unbiased manner.
GMELab/RARity’s past year of commit activity - phewmr-filter-snps Public
GMELab/phewmr-filter-snps’s past year of commit activity
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