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@BioJulia

BioJulia

Bioinformatics and Computational Biology in Julia

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  1. GenomeGraphs.jl GenomeGraphs.jl Public

    A modern genomics framework for julia

    Julia 71 7

  2. BioSequences.jl BioSequences.jl Public

    Biological sequences for the julia language

    Julia 159 48

  3. Contributing Contributing Public

    Documentation, guidelines, and policy on contributing to all BioJulia repositories

    16 7

  4. BioCore.jl BioCore.jl Public

    Core types and interfaces for BioJulia packages

    Julia 31 11

  5. BioSymbols.jl BioSymbols.jl Public

    Nucleic and amino acid primitive types

    Julia 32 14

  6. GeneticVariation.jl GeneticVariation.jl Public

    Datastructures and algorithms for working with genetic variation

    Julia 43 18

Repositories

Showing 10 of 88 repositories
  • SingleCellProjections.jl Public

    Analysis of Single Cell Expression data in Julia

    BioJulia/SingleCellProjections.jl’s past year of commit activity
    Julia 21 3 4 0 Updated Aug 12, 2025
  • BioStructures.jl Public

    A Julia package to read, write and manipulate macromolecular structures

    BioJulia/BioStructures.jl’s past year of commit activity
    Julia 104 25 10 2 Updated Aug 11, 2025
  • BioMakie.jl Public

    Plotting and interface tools for biology.

    BioJulia/BioMakie.jl’s past year of commit activity
    Julia 68 MIT 5 4 (1 issue needs help) 8 Updated Aug 2, 2025
  • CIGARStrings.jl Public

    Read and write Concise Idiosyncratic Gapped Alignment Reports.

    BioJulia/CIGARStrings.jl’s past year of commit activity
    Julia 1 MIT 0 0 0 Updated Jul 17, 2025
  • BioSequences.jl Public

    Biological sequences for the julia language

    BioJulia/BioSequences.jl’s past year of commit activity
    Julia 159 MIT 48 19 (1 issue needs help) 5 Updated Jul 16, 2025
  • KWayMerges.jl Public

    Implementation of k-way merge algorithms in Julia

    BioJulia/KWayMerges.jl’s past year of commit activity
    Julia 4 MIT 0 1 1 Updated Jul 11, 2025
  • TwoBit.jl Public

    Support for working with 2Bit formatted sequence data files

    BioJulia/TwoBit.jl’s past year of commit activity
    Julia 11 MIT 3 1 1 Updated Jul 2, 2025
  • PairwiseMappingFormat.jl Public

    Parser for the PAF format in bioinformatics

    BioJulia/PairwiseMappingFormat.jl’s past year of commit activity
    Julia 3 MIT 0 0 0 Updated Jun 16, 2025
  • XAMAuxData.jl Public

    Read auxiliary data fields in SAM, GFA and PAF formats

    BioJulia/XAMAuxData.jl’s past year of commit activity
    Julia 2 MIT 0 1 1 Updated Jun 16, 2025
  • MemoryViews.jl Public

    Simple, low-level views into memory in Julia

    BioJulia/MemoryViews.jl’s past year of commit activity
    Julia 19 MIT 1 0 1 Updated Jun 12, 2025