LANL Molecular Evolution & Epidemiology Team
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- United States of America
- https://public.lanl.gov/tkl/
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- ContactTracingForPhylogenies Public
Code from Kupperman et al_ "Predicting Impacts of Contact Tracing on Epidemiological Inference from Phylogenetic Data" (2023).
MolEvolEpid/ContactTracingForPhylogenies’s past year of commit activity - sweden-incidence Public
Code from "Sweden surpasses the UNAIDS 95-95-95 Target: Estimating HIV-1 incidence between 2003-2022"
MolEvolEpid/sweden-incidence’s past year of commit activity - SIV_divergence_dynamics Public
MolEvolEpid/SIV_divergence_dynamics’s past year of commit activity - biophybreak Public Forked from donkeyshot/phybreak
Code from Lundgren et al "Combining biomarker and virus phylogenetic models improves epidemiological source identification" in PLOS Computational Biology 2022 Aug 26;18(8):e1009741
MolEvolEpid/biophybreak’s past year of commit activity - novel_hcv_subtypes Public
Code and data from Mbisa et al. "Identification of two novel subtypes of hepatitis C virus genotype 8 and a potential new genotype in the UK successfully treated with direct acting antivirals."
MolEvolEpid/novel_hcv_subtypes’s past year of commit activity
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