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Execution fails even for 1 non-canonical character across the entire genome

Status: Open.

#46 In MDU-PHL/meningotype;

· m-nikolaidis opened on Jun 1, 2025

Provide an option to not print the header on the output

Status: Open.

#44 In MDU-PHL/meningotype;

· pvanheus opened on Jun 12, 2023

· 

Version 1.0

If an analysis ends in ERROR the return code of the tool should not be 0

Status: Open.

#43 In MDU-PHL/meningotype;

· pvanheus opened on Jun 12, 2023

· 

Version 1.0

DB should have "version number" and this version number should be reported in output

Status: Open.

#42 In MDU-PHL/meningotype;

· pvanheus opened on Jun 12, 2023

· 

Version 1.0

Updating DB outside of tool-installation directory should be possible

Status: Open.

#41 In MDU-PHL/meningotype;

· pvanheus opened on Jun 12, 2023

· 

Version 1.0

Meningotype seems to have trouble identifying FetA F5-1

Status: Open.

#37 In MDU-PHL/meningotype;

· boasvdp opened on Aug 17, 2022

· 

Version 1.0

Need to add tests for updating DB

Status: Open.

#36 In MDU-PHL/meningotype;

· andersgs opened on Aug 2, 2021

Needs some documentation on interpretation of output

asks_too_many_questions

enhancement

Status: Open.

#27 In MDU-PHL/meningotype;

· andersgs opened on Sep 8, 2017

seroWY doesn't handle gaps

bug

Status: Open.

#25 In MDU-PHL/meningotype;

· kwongj opened on Apr 18, 2017

Add capacity to perform cgMLST

enhancement

Status: Open.

#24 In MDU-PHL/meningotype;

· kwongj opened on Apr 4, 2017

Refactor code

enhancement

Status: Open.

#21 In MDU-PHL/meningotype;

· tseemann opened on Mar 26, 2017

· 

Version 1.0

Consider combining all .fas files and do a single blast

enhancement

question

Status: Open.

#20 In MDU-PHL/meningotype;

· tseemann opened on Mar 25, 2017